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SCNpilot_expt_1000_bf_scaffold_81

Search features with annotation key words

Displaying items 1-30 of 162 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_81_1
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(43..966)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036D33EB
Alpha-mannosidase {ECO:0000313|EMBL:AKD03691.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
alpha-1,2-mannosidase
SCNpilot_expt_1000_bf_scaffold_81_2
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(963..2372)
DNA (1410bp) protein (470aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI000376244C
thiol-disulfide isomerase-like thioredoxin
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:AFL83605.1}; Flags: Precursor;; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
SCNpilot_expt_1000_bf_scaffold_81_3
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2413..3822)
DNA (1410bp) protein (470aa)
Tetratricopeptide repeat protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VNT7_9SPHI
hypothetical protein rbh
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EEI92405.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
SCNpilot_expt_1000_bf_scaffold_81_4
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3861..7334)
DNA (3474bp) protein (1158aa)
TonB-dependent receptor plug n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDV9_9SPHI
TonB-dependent receptor plug {ECO:0000313|EMBL:EHQ24299.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
TonB-dependent receptor
SCNpilot_expt_1000_bf_scaffold_81_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7535..8674)
DNA (1140bp) protein (380aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC95908.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
FecR protein id=2885643 bin=GWF2_Bacteroidetes_40_14 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
anti-FecI sigma factor FecR
SCNpilot_expt_1000_bf_scaffold_81_6
unknown

Not on your lists

8772..9236
DNA (465bp) protein (155aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_81_7
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9560..10870
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00037C2886 rbh
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
SCNpilot_expt_1000_bf_scaffold_81_8
unknown

Not on your lists

11018..11428
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_81_9
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12189..12617
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Pseudomonas syringae RepID=UPI0001E29E2E
Uncharacterized protein {ECO:0000313|EMBL:KEY45701.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_81_10
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12681..16424
DNA (3744bp) protein (1248aa)
Uncharacterized protein n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZTT5_9BACE rbh
Uncharacterized protein {ECO:0000313|EMBL:EGJ72319.1}; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis DSM 18011.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_81_11
unknown

Not on your lists

16477..17022
DNA (546bp) protein (182aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_81_12
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17204..18082
DNA (879bp) protein (293aa)
Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W256_DYAFD rbh
AraC family transcriptional regulator rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACT92029.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_81_13
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18146..18517
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QZH4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX62063.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_81_14
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18534..19031
DNA (498bp) protein (166aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZF6_HALH1
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:AEE48451.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_expt_1000_bf_scaffold_81_15
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

19059..19919
DNA (861bp) protein (287aa)
Aldo/keto reductase n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R9T8_SPISS rbh
aldo/keto reductase rbh
Aldo/keto reductase {ECO:0000313|EMBL:ADK83257.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
SCNpilot_expt_1000_bf_scaffold_81_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19974..20375
DNA (402bp) protein (134aa)
Transcriptional regulator n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFM8_NIAKG
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AEV99467.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_81_17
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20755..21147
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003683509
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
single-strand binding protein; K03111 single-strand DNA-binding protein
SCNpilot_expt_1000_bf_scaffold_81_18
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21217..22233
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003790A84 rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:KIA82403.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
phage/plasmid-like protein rbh
SCNpilot_expt_1000_bf_scaffold_81_19
unknown

Not on your lists

22288..22542
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_81_20
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22591..24411
DNA (1821bp) protein (607aa)
ParB-like partition protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDT4_9SPHI
ParB-like partition protein {ECO:0000313|EMBL:EHQ24274.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
parB-like partition protein; K03497 chromosome partitioning protein, ParB family
SCNpilot_expt_1000_bf_scaffold_81_21
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(24560..25267)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI000363FE67
Uncharacterized protein {ECO:0000313|EMBL:KIF32074.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_81_22
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25490..25963
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368DEFE
DNA repair protein {ECO:0000313|EMBL:KIC89896.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
DNA repair protein RadC
SCNpilot_expt_1000_bf_scaffold_81_23
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26052..26336)
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBX0_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ27048.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_81_24
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26613..27005
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037235E4
Uncharacterized protein {ECO:0000313|EMBL:KIC89901.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_81_25
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26990..28243
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035DA900 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC89902.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Relaxase/mobilization nuclease family protein
SCNpilot_expt_1000_bf_scaffold_81_26
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28258..30243
DNA (1986bp) protein (662aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003762764 rbh
Conjugal transfer protein TraG {ECO:0000313|EMBL:KFF11161.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
type IV secretory pathway, VirD4 component
SCNpilot_expt_1000_bf_scaffold_81_27
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30446..31057
DNA (612bp) protein (204aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCU2_9SPHI
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EHQ25113.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
SCNpilot_expt_1000_bf_scaffold_81_28
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31069..31680
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCU3_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ25114.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_81_29
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31683..32708
DNA (1026bp) protein (342aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCU4_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ25115.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_81_30
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32662..35058
DNA (2397bp) protein (799aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCU5_9SPHI rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ25116.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein rbh
Displaying items 1-30 of 162 in total

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