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SCNpilot_expt_1000_bf_scaffold_654

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_654_1
unknown

Not on your lists

524..715
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_654_2
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(976..5118)
DNA (4143bp) protein (1381aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SMZ1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU27592.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_654_3
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5613..6065)
DNA (453bp) protein (151aa)
Response regulator receiver protein n=1 Tax=Flavobacterium sp. F52 RepID=J1KPM7_9FLAO
Response regulator receiver protein {ECO:0000313|EMBL:EJF99760.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
response regulator receiver protein
SCNpilot_expt_1000_bf_scaffold_654_4
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6069..8114)
DNA (2046bp) protein (682aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Flavobacterium sp. F52 RepID=J0RVH4_9FLAO rbh
PAS/PAC sensor signal transduction histidine kinase rbh
SCNpilot_expt_1000_bf_scaffold_654_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8253..9572)
DNA (1320bp) protein (440aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Niabella soli DSM 19437 RepID=H1NP56_9SPHI rbh
integral membrane sensor signal transduction histidine kinase rbh
SCNpilot_expt_1000_bf_scaffold_654_6
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9806..11320
DNA (1515bp) protein (505aa)
carbon-nitrogen hydrolase n=1 Tax=Flexithrix dorotheae RepID=UPI000375E739 rbh
carbon-nitrogen hydrolase rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_654_7
unknown

Not on your lists

11411..11905
DNA (495bp) protein (165aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_654_8
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11993..12151
DNA (159bp) protein (53aa)
Putative uncharacterized protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UPT7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EGD44911.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
SCNpilot_expt_1000_bf_scaffold_654_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12218..13108)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPE3_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60579.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_654_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13227..14552
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PE95_CHIPD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU63304.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_654_11
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14595..15377
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PE96_CHIPD rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO44391.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_654_12
unknown

Not on your lists

15381..15998
DNA (618bp) protein (206aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_654_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16013..16537
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PE99_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU63308.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_654_14
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16568..17173)
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VY78_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96979.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_654_15
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17303..19816
DNA (2514bp) protein (838aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000313|EMBL:ACU60577.1}; EC=5.99.1.3 {ECO:0000313|EMBL:ACU60577.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
DNA topoisomerase IV subunit A; K02621 topoisomerase IV subunit A [EC:5.99.1.-]
DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPE1_CHIPD
SCNpilot_expt_1000_bf_scaffold_654_16
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19887..20498
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB82_CHIPD
hypothetical protein; K08999 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU61220.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_654_17
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20527..21888
DNA (1362bp) protein (454aa)
Peptidase M43B pregnancy-associated plasma-A n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCZ4_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:AHJ99384.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
Peptidase M43B pregnancy-associated plasma-A
SCNpilot_expt_1000_bf_scaffold_654_18
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21888..23033
DNA (1146bp) protein (382aa)
Aminodeoxyfutalosine synthase {ECO:0000256|HAMAP-Rule:MF_00993}; Short=AFL synthase {ECO:0000256|HAMAP-Rule:MF_00993};; Short=Aminofutalosine synthase {ECO:0000256|HAMAP-Rule:MF_00993};; EC=2.5.1.120 {ECO:0000256|HAMAP-Rule:MF_00993};; Menaquinone biosynthetic enzyme MqnE {ECO:0000256|HAMAP-Rule:MF_00993}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
FO synthase, subunit 2 n=1 Tax=Niabella soli DSM 19437 RepID=H1NJX6_9SPHI
radical SAM protein rbh
SCNpilot_expt_1000_bf_scaffold_654_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23092..24315)
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036FB4B2
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEV96696.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_654_20
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24350..25015)
DNA (666bp) protein (222aa)
SNARE associated Golgi protein-related protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C1N2_SPHS2
hypothetical protein; K03975 membrane-associated protein
SNARE associated Golgi protein-related protein {ECO:0000313|EMBL:ADZ79305.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_expt_1000_bf_scaffold_654_21
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25059..26453)
DNA (1395bp) protein (465aa)
Na+/H+ dicarboxylate symporter n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVF7_SOLCM rbh
Na+/H+ dicarboxylate symporter rbh
Na+/H+ dicarboxylate symporter {ECO:0000313|EMBL:AFD06337.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_expt_1000_bf_scaffold_654_22
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26469..27374)
DNA (906bp) protein (302aa)
1-aminocyclopropane-1-carboxylate deaminase n=1 Tax=Pontibacter sp. BAB1700 RepID=J0V667_9BACT
1-aminocyclopropane-1-carboxylate deaminase {ECO:0000313|EMBL:KIX19841.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_654_23
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27358..28245)
DNA (888bp) protein (296aa)
GTPase Era n=1 Tax=Niabella aurantiaca RepID=UPI00035D1897
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
GTP-binding protein Era-like-protein; K03595 GTP-binding protein Era
SCNpilot_expt_1000_bf_scaffold_654_24
unknown

Not on your lists

28608..29084
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_654_25
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29059..29895
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000371B197
Membrane protein {ECO:0000313|EMBL:AHF14115.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
NLP/P60 protein; K13694 lipoprotein Spr
SCNpilot_expt_1000_bf_scaffold_654_26
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29900..31573)
DNA (1674bp) protein (558aa)
nucleotide pyrophosphatase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B76CA9
Nucleotide pyrophosphatase {ECO:0000313|EMBL:AHF15310.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
type I phosphodiesterase/nucleotide pyrophosphatase
SCNpilot_expt_1000_bf_scaffold_654_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

31652..32923
DNA (1272bp) protein (424aa)
Glycine C-acetyltransferase; K00639 glycine C-acetyltransferase [EC:2.3.1.29]
Glycine C-acetyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJP6_NIAKG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_1000_bf_scaffold_654_28
Arthrospira platensis, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

33027..33899
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Geminocystis herdmanii RepID=UPI000348674C
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EKD09757.1}; TaxID=459495 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira platensis C1.;"
dTDP-4-dehydrorhamnose reductase
SCNpilot_expt_1000_bf_scaffold_654_29
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34221..34646
DNA (426bp) protein (142aa)
Heat shock protein Hsp20 n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EGE5_RUNSL
Uncharacterized protein {ECO:0000313|EMBL:KIC89628.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
heat shock protein Hsp20; K13993 HSP20 family protein
SCNpilot_expt_1000_bf_scaffold_654_30
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34920..36332)
DNA (1413bp) protein (471aa)
Orn/DAP/Arg decarboxylase 2; K01585 arginine decarboxylase [EC:4.1.1.19] rbh
Arginine decarboxylase {ECO:0000256|SAAS:SAAS00212226}; EC=4.1.1.19 {ECO:0000256|SAAS:SAAS00212226};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Orn/DAP/Arg decarboxylase 2 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI67_CHIPD rbh
Displaying items 1-30 of 31 in total

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