name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_504_1
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(64..231)
|
UPI0003CF226C related cluster n=1 Tax=unknown RepID=UPI0003CF226C
Uncharacterized protein {ECO:0000313|EMBL:BAR58845.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_504_2
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(827..1267)
|
Uncharacterized protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZGJ0_METPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB81224.1}; Flags: Precursor;; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
|
|
SCNpilot_expt_1000_bf_scaffold_504_3
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1409..1576)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9J1_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig170, whole genome shotgun sequence {ECO:0000313|EMBL:KIU50300.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_504_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1796..2314)
|
RES domain-containing protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0K1_BREDI
Uncharacterized protein {ECO:0000313|EMBL:CEG10427.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_504_5
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2479..3402)
|
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003815097
rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQB07227.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
|
|
SCNpilot_expt_1000_bf_scaffold_504_6
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3715..4752)
|
DNA primase n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0G3D5_9SPHN
DNA primase {ECO:0000313|EMBL:EQA98170.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_504_7
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4752..9059)
|
methylase n=1 Tax=Afipia birgiae RepID=UPI0002D25EAE
rbh
Putative methylase/helicase {ECO:0000313|EMBL:BAI96857.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
putative methylase/helicase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_504_8
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9234..9491)
|
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJR5_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS68258.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
|
|
SCNpilot_expt_1000_bf_scaffold_504_9
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9488..9904)
|
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJR6_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS68259.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
|
|
SCNpilot_expt_1000_bf_scaffold_504_10
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9999..12149)
|
plasmid partitioning protein ParB n=1 Tax=Afipia birgiae RepID=UPI0002E7FF8C
rbh
Plasmid partitioning protein ParB {ECO:0000313|EMBL:EQA98175.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
nuclease; K03497 chromosome partitioning protein, ParB family
|
|
SCNpilot_expt_1000_bf_scaffold_504_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12311..13504)
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00036C0966
rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG10590.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_504_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13849..17292)
|
DEAD/DEAH box helicase-like n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q212T9_RHOPB
rbh
DEAD/DEAH box helicase-like {ECO:0000313|EMBL:ABD88597.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
DEAD/DEAH box helicase-like protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_504_13
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17372..18148)
|
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q212U0_RHOPB
rbh
Uncharacterized protein {ECO:0000313|EMBL:KAK43701.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_504_14
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18167..18721)
|
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DNW2_BRAJP
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:AHY56413.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
|
|
SCNpilot_expt_1000_bf_scaffold_504_15
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18906..19688
|
Bll8178 protein n=2 Tax=Bradyrhizobium RepID=Q89BH4_BRADU
rbh
hypothetical protein
rbh
Bll8178 protein {ECO:0000313|EMBL:BAC53443.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
|
|
SCNpilot_expt_1000_bf_scaffold_504_16
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19772..19996
|
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DNW0_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY56415.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
|
|
SCNpilot_expt_1000_bf_scaffold_504_17
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19993..22482
|
Uncharacterized protein n=2 Tax=Bradyrhizobium RepID=G7DNV9_BRAJP
rbh
Bll8177 protein {ECO:0000313|EMBL:BAC53442.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_504_18
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22484..23245)
|
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI000365FDE8
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_504_19
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23238..24584)
|
hypothetical protein n=1 Tax=Burkholderia thailandensis RepID=UPI00016A87C8
rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG10609.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_504_20
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24581..25822)
|
Integrase family protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDF0_XANP2
rbh
integrase family protein
rbh
Integrase family protein {ECO:0000313|EMBL:ABS66043.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
|
|
SCNpilot_expt_1000_bf_scaffold_504_21
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25978..26595)
|
DNA repair protein RadC n=2 Tax=Oligotropha carboxidovorans RepID=B6JJV2_OLICO
rbh
DNA repair protein RadC; K03630 DNA repair protein RadC
rbh
DNA repair protein Radc {ECO:0000313|EMBL:AEI05272.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_expt_1000_bf_scaffold_504_22
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26751..27572)
|
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
Methionine aminopeptidase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QJ20_9BRAD
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_504_23
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27665..28378)
|
Sugar fermentation stimulation protein homolog n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QGC8_9BRAD
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
sugar fermentation stimulation protein A; K06206 sugar fermentation stimulation protein A
|
|
SCNpilot_expt_1000_bf_scaffold_504_24
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28382..29695)
|
MscS Mechanosensitive ion channel n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21BT2_RHOPB
rbh
mechanosensitive ion channel MscS
rbh
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ABD86154.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
|
|
SCNpilot_expt_1000_bf_scaffold_504_25
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29942..31750
|
Potassium/proton antiporter, CPA1 family n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SVT7_NITWN
rbh
cvrA, nhaP2, ycgO; potassium/proton antiporter; K11105 cell volume regulation protein A
rbh
Potassium/proton antiporter, CPA1 family {ECO:0000313|EMBL:ABA03604.1}; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
|
|
SCNpilot_expt_1000_bf_scaffold_504_26
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31739..32425)
|
molybdate ABC transporter ATP-binding protein; K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29]
rbh
Molybdate-transporting ATPase {ECO:0000256|SAAS:SAAS00055222}; EC=3.6.3.29 {ECO:0000256|SAAS:SAAS00055222};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Molybdate ABC transporter, ATP-binding protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR23_NITHX
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_504_27
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32428..33123)
|
Molybdenum transport system permease protein ModB n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QGC2_9BRAD
Molybdenum transport system permease protein ModB {ECO:0000313|EMBL:EGP09786.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
modB; molybdate ABC transporter permease protein; K02018 molybdate transport system permease protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_504_28
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33129..33917)
|
Molybdate ABC transporter periplasmic molybdate-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HGW3_9BRAD
rbh
Molybdenum ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC57248.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
ABC transporter molybdenum-binding protein; K02020 molybdate transport system substrate-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_504_29
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34088..34591)
|
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035E22F8
Uncharacterized protein {ECO:0000313|EMBL:EJN10866.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_504_30
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34597..34806)
|
Molybdenum-pterin binding domain n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QJ12_9BRAD
Molybdenum-pterin binding domain {ECO:0000313|EMBL:EIG59768.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
TOBE domain-containing protein
|