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SCNpilot_expt_1000_bf_scaffold_356

Search features with annotation key words

Displaying items 1-30 of 169 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_356_1
unknown

Not on your lists

3..353
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_356_2
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

857..2557
DNA (1701bp) protein (567aa)
potassium-transporting ATPase subunit A; K01546 K+-transporting ATPase ATPase A chain [EC:3.6.3.12] rbh
Potassium-transporting ATPase A chain {ECO:0000255|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000255|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000255|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000255|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000255|HAMAP-Rule:MF_00275}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacu
Potassium-transporting ATPase A chain n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=ATKA_HERA2 rbh
SCNpilot_expt_1000_bf_scaffold_356_3
Aquitalea magnusonii, Aquitalea, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2572..4629
DNA (2058bp) protein (686aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=332411 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Aquitalea.;" source="Aquitalea magnusonii.;"
kdpB; K+-transporting ATPase subunit B (EC:3.6.3.12); K01547 K+-transporting ATPase ATPase B chain [EC:3.6.3.12]
potassium-transporting ATPase subunit B n=1 Tax=Methylococcus capsulatus RepID=UPI0002D86919
SCNpilot_expt_1000_bf_scaffold_356_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4626..5189
DNA (564bp) protein (188aa)
Potassium-transporting ATPase C chain n=1 Tax=Acidovorax sp. KKS102 RepID=K0HTE7_9BURK
K+-transporting ATPase C
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_356_5
unknown

Not on your lists

5499..6158
DNA (660bp) protein (220aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_356_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5998..6744)
DNA (747bp) protein (249aa)
MetA-pathway of phenol degradation, putative {ECO:0000313|EMBL:AHG90346.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
SCNpilot_expt_1000_bf_scaffold_356_7
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

6883..9519
DNA (2637bp) protein (879aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
osmosensitive K+ channel signal transduction histidine kinase; K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
Osmosensitive K+ channel signal transduction histidine kinase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AXU7_HERA2
SCNpilot_expt_1000_bf_scaffold_356_8
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

9528..10217
DNA (690bp) protein (230aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AXU8_HERA2
two component transcriptional regulator; K07667 two-component system, OmpR family, KDP operon response regulator KdpE
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABX04914.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SCNpilot_expt_1000_bf_scaffold_356_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(10214..11533)
DNA (1320bp) protein (440aa)
FAD dependent oxidoreductase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TS26_9CHLR
FAD dependent oxidoreductase {ECO:0000313|EMBL:EFH86099.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_356_10
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(11520..11888)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B3E7C1
ArsR family transcriptional regulator {ECO:0000313|EMBL:AIE86291.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_1000_bf_scaffold_356_11
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

11957..12307
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B3E7C1
ArsR family transcriptional regulator {ECO:0000313|EMBL:AIE86291.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
putative transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_356_12
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

12304..13005
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Oryza brachyantha RepID=J3LB55_ORYBR
Aquaporin Z {ECO:0000313|EMBL:AIE86287.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Os02g0232900, NIP1;1, NOD26_LIKE_INTRINSIC_PROTEIN_1;1; Similar to NOD26-like membrane integral protein ZmNIP1-1.
SCNpilot_expt_1000_bf_scaffold_356_13
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

13009..13746
DNA (738bp) protein (246aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Phosphodiesterase, MJ0936 family n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3I9_SPHTD
phosphodiesterase, MJ0936 family
SCNpilot_expt_1000_bf_scaffold_356_14
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14150..15184)
DNA (1035bp) protein (345aa)
Hydrolase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09D63_STIAD rbh
alpha/beta fold family hydrolase rbh
Hydrolase {ECO:0000313|EMBL:EAU69628.1}; Hydrolase, alpha/beta fold family protein {ECO:0000313|EMBL:ADO67843.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
SCNpilot_expt_1000_bf_scaffold_356_15
Burkholderia grimmiae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15209..15958)
DNA (750bp) protein (250aa)
short-chain dehydrogenase n=1 Tax=Zavarzinella formosa RepID=UPI0002DBC55F
Oxidoreductase {ECO:0000313|EMBL:KDR30472.1}; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia grimmiae.;"
3-oxoacyl-(acyl-carrier-protein) reductase
SCNpilot_expt_1000_bf_scaffold_356_16
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16192..17136
DNA (945bp) protein (315aa)
Phosphoribosylaminoimidazole carboxylase, ATPase subunit n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NP67_9RHOB
Phosphoribosylaminoimidazole carboxylase, ATPase subunit {ECO:0000313|EMBL:EAV45230.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
AraC family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_356_17
unknown

Not on your lists

comp(17119..17634)
DNA (516bp) protein (172aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_356_18
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17631..18494)
DNA (864bp) protein (288aa)
Tetratricopeptide repeat domain-containing protein n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PY74_METTM
tetratricopeptide repeat domain-containing protein
Tetratricopeptide repeat domain-containing protein {ECO:0000313|EMBL:ADL59172.1}; TaxID=79929 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC; 100331 / OCM 82 / Marburg) (Methanobacterium thermoautotrophicum).;"
SCNpilot_expt_1000_bf_scaffold_356_19
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(18502..19293)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Fervidibacteria bacterium JGI 0000001-G10 RepID=UPI0003682369
Uncharacterized protein {ECO:0000313|EMBL:AIE86360.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
prepilin-type N-terminal cleavage/methylation domain
SCNpilot_expt_1000_bf_scaffold_356_20
unknown

Not on your lists

comp(19290..20054)
DNA (765bp) protein (255aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_356_21
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20038..20409)
DNA (372bp) protein (124aa)
Transcriptional regulator, PadR-like family n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YBZ1_PARAH
transcriptional regulator, PadR-like family
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:AGT08968.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
SCNpilot_expt_1000_bf_scaffold_356_22
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(20592..21395)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Fervidibacteria bacterium JGI 0000001-G10 RepID=UPI0003682369
Uncharacterized protein {ECO:0000313|EMBL:AIE86360.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
prepilin-type N-terminal cleavage/methylation domain
SCNpilot_expt_1000_bf_scaffold_356_23
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21583..22386)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Streptomyces canus RepID=UPI0003738377
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EKX64988.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
AraC family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_356_24
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

22509..23966
DNA (1458bp) protein (486aa)
coagulation factor 5/8 type domain-containing protein; K01206 alpha-L-fucosidase [EC:3.2.1.51] rbh
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003645F05 rbh
Coagulation factor 5/8 type domain-containing protein {ECO:0000313|EMBL:AIE86113.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_1000_bf_scaffold_356_25
RBG_16_Deltaproteobacteria_44_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24012..25391)
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B53F1A
hypothetical protein; K06885
Tax=RBG_16_Deltaproteobacteria_44_11_curated
SCNpilot_expt_1000_bf_scaffold_356_26
CG_Elusi_01, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(25631..26290)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HCG5_9SPHI
hypothetical protein
Tax=CG_Elusi_01
SCNpilot_expt_1000_bf_scaffold_356_27
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

26411..26779
DNA (369bp) protein (123aa)
Transcriptional regulator, HxlR family n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BAK7_MEISD
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ADH62529.1}; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
SCNpilot_expt_1000_bf_scaffold_356_28
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(26811..27494)
DNA (684bp) protein (228aa)
Transcriptional regulator protein {ECO:0000313|EMBL:AIE84438.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_1000_bf_scaffold_356_29
unknown

Not on your lists

27676..28368
DNA (693bp) protein (231aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_356_30
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

28542..30356
DNA (1815bp) protein (605aa)
Cyclase (Fragment) n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2GRC9_9BURK
h16_A1278; ATP-dependent transcriptional regulator
Tax=BJP_IG2157_Anaerolineales_55_23
Displaying items 1-30 of 169 in total

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