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SCNpilot_expt_1000_bf_scaffold_2959

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2959_1
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..253)
DNA (252bp) protein (84aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4KCG8_THASP
RelE/StbE family addiction module toxin
Translation repressor RelE {ECO:0000313|EMBL:KEO89097.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
SCNpilot_expt_1000_bf_scaffold_2959_2
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(237..530)
DNA (294bp) protein (98aa)
Addiction module antitoxin, RelB/DinJ family n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4K2_9SPHN
Addiction module antitoxin, RelB/DinJ family {ECO:0000313|EMBL:EGD60472.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
RelB/DinJ family addiction module antitoxin; K07473 DNA-damage-inducible protein J
SCNpilot_expt_1000_bf_scaffold_2959_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(615..3389)
DNA (2775bp) protein (925aa)
Putative DNA methylase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JX85_STEMA
Putative DNA methylase {ECO:0000313|EMBL:AEM51044.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
DNA methylase
SCNpilot_expt_1000_bf_scaffold_2959_4

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3603..6290
DNA (2688bp) protein (896aa)
pirin n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0F44
Uncharacterized protein {ECO:0000313|EMBL:KKM97211.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
plasma membrane H+-transporting two-sector ATPase, subunit C
SCNpilot_expt_1000_bf_scaffold_2959_5
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6290..7594
DNA (1305bp) protein (435aa)
ATP /GTP binding protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0BA7
ATP-binding protein {ECO:0000313|EMBL:KEO88454.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL475.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2959_6

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7591..9291
DNA (1701bp) protein (567aa)
ATP-dependent helicase, putative; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] rbh
ATP-dependent helicase, putative n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q07GR1_ROSDO rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN61887.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_expt_1000_bf_scaffold_2959_7
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9300..9773
DNA (474bp) protein (158aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Zymomonas mobilis subsp. mobilis ATCC 29191 RepID=I6YVS0_ZYMMB
DEAD/DEAH box helicase
ATP-dependent helicase {ECO:0000313|EMBL:EQB02090.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
SCNpilot_expt_1000_bf_scaffold_2959_8
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9865..10212
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4J6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD60466.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
SCNpilot_expt_1000_bf_scaffold_2959_9
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10224..10874)
DNA (651bp) protein (217aa)
TraG domain-containing protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4J5_9SPHN
TraG domain-containing protein {ECO:0000313|EMBL:EGD60465.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
Displaying 9 items

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