name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1400_1
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..1098)
|
transposase, partial n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5E542
rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB12535.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
transposase
|
|
SCNpilot_expt_1000_bf_scaffold_1400_2
unknown
|
Not on your lists |
1129..1446
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1400_3
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1521..1913)
|
transposase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B53217
Uncharacterized protein {ECO:0000313|EMBL:EQB13022.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
transposase; K07483 transposase
|
|
SCNpilot_expt_1000_bf_scaffold_1400_4
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2173..2577)
|
UPI0003D6936F related cluster n=1 Tax=unknown RepID=UPI0003D6936F
MerR family transcriptional regulator {ECO:0000313|EMBL:KHA64812.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
MerR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_1400_5
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2646..3299
|
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037E8DC4
Co/Zn/Cd efflux system component {ECO:0000313|EMBL:KEZ14279.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
cation efflux protein
|
|
SCNpilot_expt_1000_bf_scaffold_1400_6
unknown
|
Not on your lists |
3334..3546
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1400_7
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3636..4064)
|
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003653328
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD26572.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1400_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4126..4848)
|
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000369465B
rbh
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26873.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1400_9
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4880..7231)
|
copA; cation transport ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-transporting P-type ATPase n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J5I4_9SPHN
rbh
Copper-transporting P-type ATPase {ECO:0000313|EMBL:EQB33216.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1400_10
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7269..8204)
|
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000361CFF5
rbh
Copper resistance protein CopD {ECO:0000313|EMBL:AKH18789.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
copD; copper resistance protein CopD; K07245 putative copper resistance protein D
|
|
SCNpilot_expt_1000_bf_scaffold_1400_11
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8209..8592)
|
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000373C56E
copC; copper resistance protein CopC; K07156
Copper resistance protein CopC {ECO:0000313|EMBL:BAI95320.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1400_12
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9002..9436
|
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000371DE5D
heavy metal resistance protein
Heavy metal resistance protein {ECO:0000313|EMBL:BAK67775.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1400_13
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9433..9999
|
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00035D50C6
rbh
FecI sigma-24 factor {ECO:0000313|EMBL:AKH18793.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
rpoE; ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
|
|
SCNpilot_expt_1000_bf_scaffold_1400_14
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10065..11993
|
copper-binding protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003748463
rbh
Putative multicopper oxidase {ECO:0000313|EMBL:KHS45212.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
copper resistance protein CopA
|
|
SCNpilot_expt_1000_bf_scaffold_1400_15
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11990..13093
|
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00037FD112
rbh
Copper resistance protein CopB {ECO:0000313|EMBL:EQB04103.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
copper resistance B; K07233 copper resistance protein B
|
|
SCNpilot_expt_1000_bf_scaffold_1400_16
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13115..14638
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
PAS/PAC sensor signal transduction histidine kinase; K14986 two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
rbh
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000380409E
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1400_17
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14628..15236
|
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000364CCE8
rbh
Response regulator UhpA {ECO:0000313|EMBL:KHS49403.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
two component LuxR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_1400_18
unknown
|
Not on your lists |
15695..15811
|
This feature has no annotations |