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SCNpilot_expt_1000_bf_scaffold_3144

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3144_1
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..253)
DNA (252bp) protein (84aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4KCG8_THASP
RelE/StbE family addiction module toxin
RelE/StbE family addiction module toxin {ECO:0000313|EMBL:ENO98551.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
SCNpilot_expt_1000_bf_scaffold_3144_2
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(237..530)
DNA (294bp) protein (98aa)
Addiction module antitoxin, RelB/DinJ family n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4K2_9SPHN
Addiction module antitoxin, RelB/DinJ family {ECO:0000313|EMBL:EGD60472.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
RelB/DinJ family addiction module antitoxin; K07473 DNA-damage-inducible protein J
SCNpilot_expt_1000_bf_scaffold_3144_3
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(594..3374)
DNA (2781bp) protein (927aa)
Putative DNA methylase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4K1_9SPHN rbh
Putative DNA methylase {ECO:0000313|EMBL:EGD60471.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
DNA methylase
SCNpilot_expt_1000_bf_scaffold_3144_4

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3557..5944
DNA (2388bp) protein (796aa)
Putative membrane protein n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9S307_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKM97211.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
plasma membrane H+-transporting two-sector ATPase, subunit C rbh
SCNpilot_expt_1000_bf_scaffold_3144_5
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5944..7248
DNA (1305bp) protein (435aa)
ATP /GTP binding protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0BA7 rbh
hypothetical protein rbh
ATP-binding protein {ECO:0000313|EMBL:KEO88454.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL475.;"
SCNpilot_expt_1000_bf_scaffold_3144_6

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7245..8642
DNA (1398bp) protein (466aa)
ATP-dependent helicase, putative; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-]
ATP-dependent helicase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U3D5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKN61887.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_expt_1000_bf_scaffold_3144_7
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8618..9433
DNA (816bp) protein (272aa)
ATP-dependent helicase Lhr and Lhr-like helicase (EC:3.6.1.-); K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-]
ATP-dependent helicase Lhr and Lhr-like helicase {ECO:0000313|EMBL:CCA92395.1}; EC=3.6.1.- {ECO:0000313|EMBL:CCA92395.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
ATP-dependent helicase Lhr and Lhr-like helicase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ILU3_9SPHN
SCNpilot_expt_1000_bf_scaffold_3144_8
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9525..9872
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4J6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD60466.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
SCNpilot_expt_1000_bf_scaffold_3144_9
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9866..10516)
DNA (651bp) protein (217aa)
TraG domain-containing protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4J5_9SPHN
TraG domain-containing protein {ECO:0000313|EMBL:EGD60465.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
Displaying 9 items

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