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SCNpilot_expt_1000_bf_scaffold_62

Search features with annotation key words

Displaying items 1-30 of 476 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_62_1
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1..576)
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Bacillus sp. 2_A_57_CT2 RepID=E5WDY6_9BACI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated
SCNpilot_expt_1000_bf_scaffold_62_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1191..3074)
DNA (1884bp) protein (628aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Niabella soli DSM 19437 RepID=H1NNN5_9SPHI rbh
Redoxin {ECO:0000313|EMBL:AHF15233.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen
SCNpilot_expt_1000_bf_scaffold_62_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3150..5519)
DNA (2370bp) protein (790aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQA9_9SPHI
Peptidase S9 {ECO:0000313|EMBL:AHF15881.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
peptidase S9 prolyl oligopeptidase active site domain-containing protein
SCNpilot_expt_1000_bf_scaffold_62_4
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5534..6460)
DNA (927bp) protein (309aa)
Membrane protein {ECO:0000313|EMBL:KIA86804.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
Putative uncharacterized protein id=4974919 bin=GWA2_Flavobacterium_35_26 species=Cellulophaga algicola genus=Cellulophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds rbh
hypothetical protein; K08994 putative membrane protein rbh
SCNpilot_expt_1000_bf_scaffold_62_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6492..7283
DNA (792bp) protein (264aa)
Phenylalanyl-tRNA synthetase, alpha subunit n=1 Tax=Pedobacter sp. BAL39 RepID=A6EAX3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC96235.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein; K09933 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_62_6
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7274..8164)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000367B84F
Aldo/keto reductase {ECO:0000313|EMBL:EJF08908.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
aldo/keto reductase
SCNpilot_expt_1000_bf_scaffold_62_7
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8212..9183
DNA (972bp) protein (324aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Saprospira grandis DSM 2844 RepID=J0P010_9SPHI
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EJF53104.1}; Flags: Precursor;; TaxID=694433 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis DSM 2844.;"
alpha/beta hydrolase
SCNpilot_expt_1000_bf_scaffold_62_8
unknown

Not on your lists

comp(9180..9401)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_62_9
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9547..10050)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI0003790F2C
Strain DSM 12611 Contig03, whole genome shotgun sequence {ECO:0000313|EMBL:KIO54301.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_62_10
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10159..11004
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FD12_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EJF08111.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_62_11
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11073..12140)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029AFA2D
Contig17, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78289.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_62_12
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12160..12804)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003607F0C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96115.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_62_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12996..16535
DNA (3540bp) protein (1180aa)
Chromosome partition protein Smc n=1 Tax=Niabella soli DSM 19437 RepID=H1NN11_9SPHI
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
condensin subunit Smc; K03529 chromosome segregation protein
SCNpilot_expt_1000_bf_scaffold_62_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16695..17762)
DNA (1068bp) protein (356aa)
fructose-bisphosphate aldolase; K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:AEW00785.1}; EC=4.1.2.13 {ECO:0000313|EMBL:AEW00785.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Fructose-bisphosphate aldolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJN8_NIAKG
SCNpilot_expt_1000_bf_scaffold_62_15
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17902..23667
DNA (5766bp) protein (1922aa)
TonB-dependent receptor plug n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y3H0_PEDHD rbh
TonB-dependent receptor plug rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:ACU05395.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_1000_bf_scaffold_62_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23697..24806)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NMQ6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF14460.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_62_17
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24787..25587)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00036C92AA
Iron ABC transporter {ECO:0000313|EMBL:KGE88822.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
ABC transporter periplasmic protein
SCNpilot_expt_1000_bf_scaffold_62_18
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26269..27627)
DNA (1359bp) protein (453aa)
cystathionine beta-synthase; K01697 cystathionine beta-synthase [EC:4.2.1.22]
Cystathionine beta-synthase n=1 Tax=Niabella soli DSM 19437 RepID=H1NK06_9SPHI
Cystathionine beta-synthase {ECO:0000313|EMBL:KIC89308.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_expt_1000_bf_scaffold_62_19
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27755..28273)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJN0_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC91386.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_62_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28291..28875)
DNA (585bp) protein (195aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJM9_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW00776.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_62_21
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29107..29547
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y6P4_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ26836.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_62_22
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29775..31364)
DNA (1590bp) protein (530aa)
carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102]
carboxyl-terminal protease n=1 Tax=Niabella aurantiaca RepID=UPI000378A17E
Carboxyl-terminal protease {ECO:0000313|EMBL:AHF14058.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_62_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31476..32318
DNA (843bp) protein (281aa)
N-acetylglucosamine kinase-like protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NK04_9SPHI
ATPase {ECO:0000313|EMBL:AHF14059.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
N-acetylglucosamine kinase-like protein
SCNpilot_expt_1000_bf_scaffold_62_24
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32337..33149
DNA (813bp) protein (271aa)
murQ; N-acetylmuramic acid 6-phosphate etherase; K07106 N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] rbh
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitino
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL32_CHIPD rbh
SCNpilot_expt_1000_bf_scaffold_62_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33431..35875
DNA (2445bp) protein (815aa)
aspartate kinase; K12524 bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
Aspartate kinase {ECO:0000313|EMBL:AEV96515.1}; EC=2.7.2.4 {ECO:0000313|EMBL:AEV96515.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Aspartate kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK81_NIAKG
SCNpilot_expt_1000_bf_scaffold_62_26
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35885..36805
DNA (921bp) protein (307aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
homoserine kinase; K00872 homoserine kinase [EC:2.7.1.39]
Homoserine kinase n=1 Tax=Niabella soli DSM 19437 RepID=H1NTQ3_9SPHI
SCNpilot_expt_1000_bf_scaffold_62_27
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36840..38135
DNA (1296bp) protein (432aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1]
Threonine synthase n=1 Tax=Niabella soli DSM 19437 RepID=H1NTQ4_9SPHI
Threonine synthase {ECO:0000313|EMBL:AHF16832.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_62_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

38196..38759
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJM3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00770.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_62_29
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

38873..39556
DNA (684bp) protein (228aa)
succinate dehydrogenase n=1 Tax=Niabella aurantiaca RepID=UPI00037112A2
Succinate dehydrogenase {ECO:0000313|EMBL:KIC90018.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; K00241 succinate dehydrogenase cytochrome b556 subunit
SCNpilot_expt_1000_bf_scaffold_62_30
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

39608..41584
DNA (1977bp) protein (659aa)
Succinate dehydrogenase {ECO:0000313|EMBL:AHF15666.1}; EC=1.3.5.1 {ECO:0000313|EMBL:AHF15666.1};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
succinate dehydrogenase or fumarate reductase, flavoprotein subunit (EC:1.3.99.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] rbh
succinate dehydrogenase n=1 Tax=Niabella aurantiaca RepID=UPI00035D1EC6
Displaying items 1-30 of 476 in total

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