name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_106_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(103..843)
|
Beta-lactamase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS8_NIAKG
Beta-lactamase {ECO:0000313|EMBL:KIC94558.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
beta-lactamase
|
|
SCNpilot_expt_1000_bf_scaffold_106_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(862..2202)
|
cell cycle protein n=1 Tax=Niabella aurantiaca RepID=UPI0003701662
Cell cycle protein {ECO:0000313|EMBL:AHF15714.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
cell cycle protein; K05837 rod shape determining protein RodA
|
|
SCNpilot_expt_1000_bf_scaffold_106_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(2199..4304)
|
peptidoglycan glycosyltransferase n=1 Tax=Niabella aurantiaca RepID=UPI00035DB774
rbh
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:AHF15715.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
peptidoglycan glycosyltransferase; K05515 penicillin-binding protein 2
|
|
SCNpilot_expt_1000_bf_scaffold_106_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(4432..4968)
|
Rod shape-determining protein MreD n=1 Tax=Niabella soli DSM 19437 RepID=H1NUF1_9SPHI
Rod shape-determining protein MreD {ECO:0000313|EMBL:AHF15716.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
rod shape-determining protein MreD
|
|
SCNpilot_expt_1000_bf_scaffold_106_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(4965..5840)
|
Rod shape-determining protein MreC n=1 Tax=Niabella soli DSM 19437 RepID=H1NUF2_9SPHI
rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF17684.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
rod shape-determining protein MreC; K03570 rod shape-determining protein MreC
|
|
SCNpilot_expt_1000_bf_scaffold_106_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(5928..6953)
|
Cell shape determining protein, MreB/Mrl family n=1 Tax=Niabella soli DSM 19437 RepID=H1NUF3_9SPHI
rbh
Cell shape-determining protein MreB {ECO:0000313|EMBL:AHF15717.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
MreB/Mrl family cell shape determining protein; K03569 rod shape-determining protein MreB and related proteins
|
|
SCNpilot_expt_1000_bf_scaffold_106_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(7321..8430)
|
Tryptophan 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000256|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000256|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan oxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan pyrrolase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophanase {ECO:0000256|HAMAP-Rule:MF_01972}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="F
tryptophan 23-dioxygenase; K00453 tryptophan 2,3-dioxygenase [EC:1.13.11.11]
hypothetical protein n=1 Tax=Vitreoscilla stercoraria RepID=UPI000365ED94
|
|
SCNpilot_expt_1000_bf_scaffold_106_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(8463..9773)
|
phosphoribosylamine--glycine ligase; K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13]
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
phosphoribosylamine--glycine ligase n=1 Tax=Niabella aurantiaca RepID=UPI000368110D
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_106_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
9926..11584
|
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036CAEE8
rbh
amino acid/peptide transporter; K03305 proton-dependent oligopeptide transporter, POT family
rbh
Amino acid/peptide transporter {ECO:0000313|EMBL:ACU57697.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
|
|
SCNpilot_expt_1000_bf_scaffold_106_10
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
11689..13329
|
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037F513F
amino acid/peptide transporter (peptide:H symporter)
Amino acid/peptide transporter (Peptide:H symporter) {ECO:0000313|EMBL:AFD06526.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
|
|
SCNpilot_expt_1000_bf_scaffold_106_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
13450..15507
|
Oligopeptide transporter, OPT family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PD75_CHIPD
oligopeptide transporter
Oligopeptide transporter, OPT family {ECO:0000313|EMBL:ACU57698.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
|
|
SCNpilot_expt_1000_bf_scaffold_106_12
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
15742..16185
|
Uncharacterized protein {ECO:0000313|EMBL:ETZ21899.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
|
|
SCNpilot_expt_1000_bf_scaffold_106_13
unknown
|
Not on your lists |
16207..16710
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_106_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(17108..18307)
|
twin-arginine translocation pathway signal n=1 Tax=Niabella aurantiaca RepID=UPI00036B586D
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:AEW01986.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
SCNpilot_expt_1000_bf_scaffold_106_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(18336..19787)
|
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003821247
Uncharacterized protein {ECO:0000313|EMBL:AHF16409.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_106_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(19897..20208)
|
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003731CFE
Cytochrome C {ECO:0000313|EMBL:AHF16554.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
|
|
SCNpilot_expt_1000_bf_scaffold_106_17
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(20284..20628)
|
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NRF6_9SPHI
Cytochrome C {ECO:0000313|EMBL:AHF16554.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
|
|
SCNpilot_expt_1000_bf_scaffold_106_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(20811..22082)
|
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11]
Seryl-tRNA synthetase {ECO:0000313|EMBL:AEW01983.1}; EC=6.1.1.11 {ECO:0000313|EMBL:AEW01983.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Seryl-tRNA synthetase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMJ5_NIAKG
|
|
SCNpilot_expt_1000_bf_scaffold_106_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
22246..22509
|
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035ED83B
Uncharacterized protein {ECO:0000313|EMBL:KIC96093.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_106_20
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
22702..23409
|
cyclophilin type peptidyl-prolyl cis-trans isomerase; K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase cyclophilin type n=1 Tax=Niabella soli DSM 19437 RepID=H1NPX1_9SPHI
Peptidylprolyl isomerase {ECO:0000313|EMBL:AHF14895.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
|
|
SCNpilot_expt_1000_bf_scaffold_106_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(23540..26002)
|
TonB-dependent receptor plug n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK04_NIAKG
rbh
TonB-dependent receptor plug
rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:AEW02942.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
SCNpilot_expt_1000_bf_scaffold_106_22
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
26183..26560
|
glycine cleavage system protein H n=1 Tax=Niabella aurantiaca RepID=UPI00036BDE24
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Glycine cleavage system H protein; K02437 glycine cleavage system H protein
|
|
SCNpilot_expt_1000_bf_scaffold_106_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
26631..27035
|
VanZ family protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQS9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17753.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
|
|
SCNpilot_expt_1000_bf_scaffold_106_24
uncultured bacterium, Bacteria
|
Not on your lists |
comp(27522..28154)
|
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037087A7
Uncharacterized protein {ECO:0000313|EMBL:AIA19131.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_106_25
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(28264..29331)
|
Peptide chain release factor 1 n=1 Tax=Niabella soli DSM 19437 RepID=H1NRH1_9SPHI
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
peptide chain release factor 1 (bRF-1); K02835 peptide chain release factor 1
|
|
SCNpilot_expt_1000_bf_scaffold_106_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
29413..30564
|
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003809E8D
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AEW01974.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
SCNpilot_expt_1000_bf_scaffold_106_27
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
30578..32506
|
Possible cytochrome C peroxidase n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11QF6_CYTH3
Uncharacterized protein {ECO:0000313|EMBL:GAL86193.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
|
|
SCNpilot_expt_1000_bf_scaffold_106_28
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
32756..33115
|
Uncharacterized protein {ECO:0000313|EMBL:GAL86194.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
|
|
SCNpilot_expt_1000_bf_scaffold_106_29
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(33116..33841)
|
DNA repair protein RecO n=1 Tax=Niabella soli DSM 19437 RepID=H1NRG9_9SPHI
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
DNA replication and repair protein RecO; K03584 DNA repair protein RecO (recombination protein O)
|
|
SCNpilot_expt_1000_bf_scaffold_106_30
unknown
|
Not on your lists |
comp(33975..34844)
|
This feature has no annotations |