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SCNpilot_expt_1000_bf_scaffold_517

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_517_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(218..598)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036405FE
Uncharacterized protein {ECO:0000313|EMBL:AHF17597.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_517_2
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(782..1507)
DNA (726bp) protein (242aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
pyridoxine 5'-phosphate synthase; K03474 pyridoxine 5-phosphate synthase [EC:2.6.99.2]
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Niabella aurantiaca RepID=UPI00037ADC78
SCNpilot_expt_1000_bf_scaffold_517_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1541..2344)
DNA (804bp) protein (268aa)
5'-nucleotidase, lipoprotein e(P4) family n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y097_9SPHI
5'-nucleotidase, lipoprotein e(P4) family {ECO:0000313|EMBL:EHQ28146.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
5'-nucleotidase
SCNpilot_expt_1000_bf_scaffold_517_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2393..2665)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037EA2C0
Uncharacterized protein {ECO:0000313|EMBL:AHF17613.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_517_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2769..3608)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPY2_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99976.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_517_6
unknown

Not on your lists

comp(3627..4094)
DNA (468bp) protein (156aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_517_7
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4137..5132
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPY0_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO43413.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_517_8
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(5280..6038)
DNA (759bp) protein (253aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCI4_NIAKG
LytTR family two component transcriptional regulator
Tax=GWB2_Ignavibacteria_35_6b_curated
SCNpilot_expt_1000_bf_scaffold_517_9
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6032..7057)
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000365A44A
Putative two-component histidine kinase {ECO:0000313|EMBL:GAO42233.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
putative signal transduction histidine kinase
SCNpilot_expt_1000_bf_scaffold_517_10
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7725..10658
DNA (2934bp) protein (978aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00036F8097 rbh
Uncharacterized protein {ECO:0000313|EMBL:ERM82170.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
tonb-dependent receptor plug
SCNpilot_expt_1000_bf_scaffold_517_11
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10689..12119
DNA (1431bp) protein (477aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00037652A9
Uncharacterized protein {ECO:0000313|EMBL:ERM82169.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
ragb/susd domain protein
SCNpilot_expt_1000_bf_scaffold_517_12
unknown

Not on your lists

12151..13071
DNA (921bp) protein (307aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_517_13
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13515..14147
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000363F88B
2Fe-2S iron-sulfur cluster binding domain-containing protein; K13483 xanthine dehydrogenase YagT iron-sulfur-binding subunit
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ABQ07210.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_expt_1000_bf_scaffold_517_14
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14144..15121
DNA (978bp) protein (326aa)
molybdopterin dehydrogenase FAD-binding protein; K11178 xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
Xanthine dehydrogenase YagS FAD-binding subunit {ECO:0000313|EMBL:CCH51891.1}; EC=1.17.1.4 {ECO:0000313|EMBL:CCH51891.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Xanthine dehydrogenase YagS FAD-binding subunit n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GDB7_9BACT rbh
SCNpilot_expt_1000_bf_scaffold_517_15
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15132..17321
DNA (2190bp) protein (730aa)
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase; K11177 xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] rbh
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDT1_CHIPD rbh
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding {ECO:0000313|EMBL:ACU59660.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_517_16
unknown

Not on your lists

17408..17644
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000372D528
SCNpilot_expt_1000_bf_scaffold_517_17
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17641..18078
DNA (438bp) protein (146aa)
Nuclear protein SET n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDP1_NIAKG
Nuclear protein SET {ECO:0000313|EMBL:KIC94124.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
nuclear protein SET; K07117
SCNpilot_expt_1000_bf_scaffold_517_18
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18139..21120
DNA (2982bp) protein (994aa)
Histidine kinase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZS5_DYAFD rbh
histidine kinase rbh
Histidine kinase {ECO:0000313|EMBL:ACT93553.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_517_19
Cellulophaga geojensis, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21306..23465
DNA (2160bp) protein (720aa)
Conserved repeat protein n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KZF1_9SYNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EWH14586.1}; TaxID=1328323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga geojensis KL-A.;"
SCNpilot_expt_1000_bf_scaffold_517_20
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23644..24810
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VIF3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK59855.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_517_21
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24850..25446)
DNA (597bp) protein (199aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FS77_ECHVK
Uncharacterized protein {ECO:0000313|EMBL:KIC89232.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
SCNpilot_expt_1000_bf_scaffold_517_22
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25511..26272)
DNA (762bp) protein (254aa)
LytTr DNA-binding region n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZE7_PEDHD rbh
LytTr DNA-binding subunit rbh
LytTr DNA-binding region {ECO:0000313|EMBL:ACU04643.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_1000_bf_scaffold_517_23
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26269..27363)
DNA (1095bp) protein (365aa)
Histidine kinase internal region n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZE8_PEDHD rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ23560.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
histidine kinase internal subunit rbh
SCNpilot_expt_1000_bf_scaffold_517_24
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27371..28357)
DNA (987bp) protein (329aa)
NAD-dependent epimerase/dehydratase; K00091 dihydroflavonol-4-reductase [EC:1.1.1.219] rbh
NAD-dependent epimerase/dehydratase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZE9_PEDHD rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ACU04645.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_1000_bf_scaffold_517_25
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28363..29163)
DNA (801bp) protein (267aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZF0_PEDHD
Short-chain dehydrogenase {ECO:0000313|EMBL:ETZ23558.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_1000_bf_scaffold_517_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29174..29806)
DNA (633bp) protein (211aa)
Fatty acid hydroxylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THE3_NIAKG
fatty acid hydroxylase
Fatty acid hydroxylase {ECO:0000313|EMBL:AEW02789.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_517_27
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30078..32333
DNA (2256bp) protein (752aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBY4_NIAKG rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO44099.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_517_28
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32335..33429
DNA (1095bp) protein (365aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Daphnia pulex RepID=E9I7N5_DAPPU
Uncharacterized protein {ECO:0000313|EMBL:GAO44100.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_517_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33459..41051
DNA (7593bp) protein (2531aa)
PA14 domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAM8_NIAKG
PA14 domain protein {ECO:0000313|EMBL:AEV99208.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PA14 domain-containing protein
SCNpilot_expt_1000_bf_scaffold_517_30
unknown

Not on your lists

41054..41845
DNA (792bp) protein (264aa)

This feature has no annotations

Displaying items 1-30 of 50 in total

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