name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_41_1
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..74
|
30S ribosomal protein S10 n=11 Tax=Stenotrophomonas RepID=RS10_STRM5
30S ribosomal protein S10; K02946 small subunit ribosomal protein S10
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
|
|
SCNpilot_expt_1000_bf_scaffold_41_2
unknown
|
Not on your lists |
318..629
|
|
|
SCNpilot_expt_1000_bf_scaffold_41_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
663..1304
|
50S ribosomal protein L3 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WL69_9GAMM
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
LSU ribosomal protein L3P
|
|
SCNpilot_expt_1000_bf_scaffold_41_4
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1316..1921
|
50S ribosomal protein L4 n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KYK4_FRAAD
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
|
|
SCNpilot_expt_1000_bf_scaffold_41_5
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1918..2208
|
50S ribosomal protein L23 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B792AD
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
|
|
SCNpilot_expt_1000_bf_scaffold_41_6
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2266..3048
|
50S ribosomal protein L2 n=1 Tax=Rudaea cellulosilytica RepID=UPI000360E4AE
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2
|
|
SCNpilot_expt_1000_bf_scaffold_41_7
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3061..3339
|
30S ribosomal protein S19 n=1 Tax=Rudaea cellulosilytica RepID=UPI00036E0658
SSU ribosomal protein S19P
Tax=BJP_08E140C01_Xanthomonadales_64_42
|
|
SCNpilot_expt_1000_bf_scaffold_41_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3351..3686
|
50S ribosomal protein L22 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F86420
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
|
|
SCNpilot_expt_1000_bf_scaffold_41_9
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3704..4411
|
Small subunit ribosomal protein S3 n=2 Tax=Xanthomonas RepID=V7ZHI6_9XANT
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3
|
|
SCNpilot_expt_1000_bf_scaffold_41_10
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4414..4827
|
50S ribosomal protein L16 n=1 Tax=Dyella japonica RepID=UPI000305A51A
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
|
|
SCNpilot_expt_1000_bf_scaffold_41_11
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4827..5012
|
50S ribosomal protein L29 n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URZ3_PSEUP
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
|
|
SCNpilot_expt_1000_bf_scaffold_41_12
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5024..5287
|
30S ribosomal protein S17 id=2431961 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
Tax=GWF1_Xanthomonadales_69_6_curated
|
|
SCNpilot_expt_1000_bf_scaffold_41_13
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5310..5678
|
50S ribosomal protein L14 n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URZ1_PSEUP
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
|
|
SCNpilot_expt_1000_bf_scaffold_41_14
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5692..6006
|
50S ribosomal protein L24 n=1 Tax=Dyella ginsengisoli RepID=UPI0003453922
ribosomal protein L24, bacterial/organelle
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
SCNpilot_expt_1000_bf_scaffold_41_15
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6018..6557
|
50S ribosomal protein L5 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4DF36
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
ribosomal protein L5
|
|
SCNpilot_expt_1000_bf_scaffold_41_16
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6575..6880
|
30S ribosomal protein S14 n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000373523B
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
|
|
SCNpilot_expt_1000_bf_scaffold_41_17
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6921..7316
|
30S ribosomal protein S8 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNK2_9GAMM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8
|
|
SCNpilot_expt_1000_bf_scaffold_41_18
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7330..7857
|
50S ribosomal protein L6 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNK3_9GAMM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
LSU ribosomal protein L6P
|
|
SCNpilot_expt_1000_bf_scaffold_41_19
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7918..8271
|
50S ribosomal protein L18 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VM87_9GAMM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
LSU ribosomal protein L18P
|
|
SCNpilot_expt_1000_bf_scaffold_41_20
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8416..8928
|
30S ribosomal protein S5 n=1 Tax=Rudaea cellulosilytica RepID=UPI00037C498F
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5
|
|
SCNpilot_expt_1000_bf_scaffold_41_21
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8918..9115
|
50S ribosomal protein L30 n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KYM1_FRAAD
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
|
|
SCNpilot_expt_1000_bf_scaffold_41_22
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9141..9575
|
50S ribosomal protein L15 n=1 Tax=Rudaea cellulosilytica RepID=UPI000364F998
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15
|
|
SCNpilot_expt_1000_bf_scaffold_41_23
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9580..10890
|
preprotein translocase subunit SecY n=1 Tax=Dyella japonica RepID=UPI00031E446A
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
preprotein translocase, SecY subunit
|
|
SCNpilot_expt_1000_bf_scaffold_41_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11028..11384
|
30S ribosomal protein S13 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WL48_9GAMM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
30S ribosomal protein S13
|
|
SCNpilot_expt_1000_bf_scaffold_41_25
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11403..11795
|
30S ribosomal protein S11 n=4 Tax=Xanthomonas RepID=D2UBJ4_XANAP
rpsK; 30S ribosomal protein S11; K02948 small subunit ribosomal protein S11
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
|
|
SCNpilot_expt_1000_bf_scaffold_41_26
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11807..12433
|
30S ribosomal protein S4 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B75DD4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4
|
|
SCNpilot_expt_1000_bf_scaffold_41_27
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12452..13447
|
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Rudaea cellulosilytica RepID=UPI0003710C20
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_41_28
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13479..13862
|
50S ribosomal protein L17 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNL3_9GAMM
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17
|
|
SCNpilot_expt_1000_bf_scaffold_41_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14074..14601
|
Disulfide bond formation protein B n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WL43_9GAMM
Disulfide bond formation protein B {ECO:0000256|HAMAP-Rule:MF_00286}; Disulfide oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00286}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
disulfide bond formation protein DsbB
|
|
SCNpilot_expt_1000_bf_scaffold_41_30
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14693..16093
|
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Dyella ginsengisoli RepID=UPI0003449E0F
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:KGQ19475.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
|