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SCNpilot_expt_1000_bf_scaffold_138

Search features with annotation key words

Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_138_1
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42..284)
DNA (243bp) protein (81aa)
Transposase IS3/IS911 family protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TRB5_ACIAC
transposase IS3/IS911 family protein; K07483 transposase
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ABM33503.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
SCNpilot_expt_1000_bf_scaffold_138_2
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(430..990)
DNA (561bp) protein (187aa)
Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD n=1 Tax=Acinetobacter sp. CIP 53.82 RepID=N9L1S1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJV32049.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
SCNpilot_expt_1000_bf_scaffold_138_3
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(987..2243)
DNA (1257bp) protein (419aa)
N-glycosyltransferase; K11936 biofilm PGA synthesis N-glycosyltransferase PgaC [EC:2.4.-.-] rbh
N-glycosyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E1AA3D rbh
N-glycosyltransferase {ECO:0000313|EMBL:KJV32048.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
SCNpilot_expt_1000_bf_scaffold_138_4
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2250..4106)
DNA (1857bp) protein (619aa)
polysaccharide deacetylase; K11931 biofilm PGA synthesis lipoprotein PgaB [EC:3.-.-.-] rbh
Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XLG0_9XANT rbh
Hemin storage protein {ECO:0000313|EMBL:EYR70053.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
SCNpilot_expt_1000_bf_scaffold_138_5
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4106..6481)
DNA (2376bp) protein (792aa)
hemin storage protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000303F597 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJV32046.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hemin storage system, HmsH protein; K11935 biofilm PGA synthesis protein PgaA rbh
SCNpilot_expt_1000_bf_scaffold_138_6
Burkholderia sp. 2002721687, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6927..7721)
DNA (795bp) protein (265aa)
4'-phosphopantetheinyl transferase; K06133 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
4''''-phosphopantetheinyl transferase n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A708F
4'-phosphopantetheinyl transferase superfamily protein {ECO:0000313|EMBL:AJY39558.1}; TaxID=1468409 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. 2002721687.;"
SCNpilot_expt_1000_bf_scaffold_138_7
unknown

Not on your lists

7897..8283
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_138_8
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8384..10180
DNA (1797bp) protein (599aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B717EE
Uncharacterized protein {ECO:0000313|EMBL:KFL37863.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
outer membrane efflux protein
SCNpilot_expt_1000_bf_scaffold_138_9
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10177..11571
DNA (1395bp) protein (465aa)
copper oxidase n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B4ED72
Multicopper oxidase type 3 {ECO:0000313|EMBL:EIT67724.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
multicopper oxidase, type 3 rbh
SCNpilot_expt_1000_bf_scaffold_138_10
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11792..15454
DNA (3663bp) protein (1221aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D57A1A rbh
signal transduction histidine kinase rbh
SCNpilot_expt_1000_bf_scaffold_138_11
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15516..16349
DNA (834bp) protein (278aa)
methylase of chemotaxis methyl-accepting protein; K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80] rbh
chemotaxis protein CheR n=1 Tax=Nevskia ramosa RepID=UPI0003B72F90 rbh
Chemotaxis protein CheR {ECO:0000313|EMBL:AIF49334.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_expt_1000_bf_scaffold_138_12
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16445..17764)
DNA (1320bp) protein (440aa)
Fibronectin type III domain protein id=4056908 bin=GWA2_Elusimicrobia_66_18 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
NHL repeat containing protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
SCNpilot_expt_1000_bf_scaffold_138_13
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18210..18779
DNA (570bp) protein (190aa)
chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61]
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030D7AA2
Chemotaxis protein CheY {ECO:0000313|EMBL:AIF49335.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_expt_1000_bf_scaffold_138_14
unknown

Not on your lists

19194..19427
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_138_15
unknown

Not on your lists

comp(19525..19776)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_138_16
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19776..19934)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZC98_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT69469.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_138_17
unknown

Not on your lists

comp(20020..20391)
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_138_18
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20703..21749
DNA (1047bp) protein (349aa)
short-chain dehydrogenase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00036DCB99 rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:EYR70265.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_expt_1000_bf_scaffold_138_19
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21792..22346
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VVI1_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP80338.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_138_20
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22526..23794
DNA (1269bp) protein (423aa)
vipA; Vi polysaccharide biosynthesis protein vipA/tviB (EC:1.1.1.-); K02474 UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.-]
Vi polysaccharide biosynthesis protein vipA/tviB {ECO:0000313|EMBL:AEI79017.1}; EC=1.1.1.- {ECO:0000313|EMBL:AEI79017.1};; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
Vi polysaccharide biosynthesis protein vipA/tviB n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GMW3_CUPNN
SCNpilot_expt_1000_bf_scaffold_138_21
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23908..24915
DNA (1008bp) protein (336aa)
Capsular polysaccharide biosynthesis protein I; K08679 UDP-glucuronate 4-epimerase [EC:5.1.3.6]
Capsular polysaccharide biosynthesis protein I n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7USE1_PSEUP
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_expt_1000_bf_scaffold_138_22
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25188..27023
DNA (1836bp) protein (612aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fruct
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJJ9_9GAMM
glucosamine--fructose-6-phosphate aminotransferase, isomerizing
SCNpilot_expt_1000_bf_scaffold_138_23
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27172..27792)
DNA (621bp) protein (207aa)
methylmalonyl-CoA epimerase; K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC460 RepID=V4RFK8_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:GAO38835.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
SCNpilot_expt_1000_bf_scaffold_138_24
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27848..28630)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E3DE1
Cell division protein ZipA {ECO:0000256|RuleBase:RU003612}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
cell division protein ZipA
SCNpilot_expt_1000_bf_scaffold_138_25
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28647..32147)
DNA (3501bp) protein (1167aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000374C5E8 rbh
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
chromosome segregation protein SMC
SCNpilot_expt_1000_bf_scaffold_138_26
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32468..33325
DNA (858bp) protein (286aa)
Uncharacterized protein id=2854287 bin=GWF1_Xanthomonadales_69_6 species=Gallaecimonas xiamenensis genus=Gallaecimonas taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
hypothetical protein rbh
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_expt_1000_bf_scaffold_138_27
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33336..34559
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX06_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KGI78142.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_138_28
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35177..36349
DNA (1173bp) protein (391aa)
MFS transporter n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KTR5_STEMA
MFS transporter {ECO:0000313|EMBL:EQM83162.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
major facilitator superfamily protein; K05820 MFS transporter, PPP family, 3-phenylpropionic acid transporter
SCNpilot_expt_1000_bf_scaffold_138_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36328..37287)
DNA (960bp) protein (320aa)
Elongation factor P--(R)-beta-lysine ligase {ECO:0000256|SAAS:SAAS00088906}; EC=6.3.1.- {ECO:0000256|SAAS:SAAS00088909};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Lysyl-tRNA synthetase-like protein GenX n=1 Tax=Rhodanobacter denitrificans RepID=M4NGN0_9GAMM
lysyl-tRNA synthetase-like protein GenX
SCNpilot_expt_1000_bf_scaffold_138_30
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37284..39665)
DNA (2382bp) protein (794aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
DNA ligase, NAD-dependent; K01972 DNA ligase (NAD+) [EC:6.5.1.2]
NAD-dependent DNA ligase LigA n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B55E36
Displaying items 1-30 of 120 in total

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