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SCNpilot_expt_1000_bf_scaffold_948

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_948_1
unknown

Not on your lists

2..70
DNA (69bp) protein (23aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_948_2
unknown

Not on your lists

123..617
DNA (495bp) protein (165aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_948_3
unknown

Not on your lists

660..1592
DNA (933bp) protein (311aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_948_4
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1721..2464)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D1C4_STEMA
Strain LMCP11 contig_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27760.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_948_5
unknown

Not on your lists

comp(2461..3120)
DNA (660bp) protein (220aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_948_6
unknown

Not on your lists

comp(3194..4057)
DNA (864bp) protein (288aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_948_7
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4596..4892
DNA (297bp) protein (99aa)
DNA ligase D n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030C0542
Putative DNA ligase D {ECO:0000313|EMBL:AHG65096.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordensis DPN7.;"
ATP-dependent DNA ligase
SCNpilot_expt_1000_bf_scaffold_948_8
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4985..6559)
DNA (1575bp) protein (525aa)
Putative uncharacterized protein n=1 Tax=Francisella novicida FTG RepID=E2MRR7_FRANO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHC72606.1}; TaxID=913080 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Mississippi str. A4-633.;"
SCNpilot_expt_1000_bf_scaffold_948_9
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6967..7419
DNA (453bp) protein (151aa)
Helix-turn-helix domain protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V6A3_VARPE
Uncharacterized protein {ECO:0000313|EMBL:KFN48242.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
XRE family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_948_10
unknown

Not on your lists

comp(7676..8350)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000369A420
SCNpilot_expt_1000_bf_scaffold_948_11
unknown

Not on your lists

comp(8618..9523)
DNA (906bp) protein (302aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_948_12
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9520..12225)
DNA (2706bp) protein (902aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MQE7_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE07616.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
SCNpilot_expt_1000_bf_scaffold_948_13
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12406..12663)
DNA (258bp) protein (86aa)
DNA-binding protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WD14_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJV36958.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_948_14
unknown

Not on your lists

12856..13470
DNA (615bp) protein (205aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_948_15
unknown

Not on your lists

comp(13491..13766)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_948_16
unknown

Not on your lists

comp(13776..14102)
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_948_17
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14213..15298
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F94015
Uncharacterized protein {ECO:0000313|EMBL:AJC46373.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
LuxR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_948_18
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15334..16167)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri KOS6 RepID=K6CS31_PSEST
Uncharacterized protein {ECO:0000313|EMBL:EWC39944.1}; TaxID=1218352 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri KOS6.;"
SCNpilot_expt_1000_bf_scaffold_948_19
unknown

Not on your lists

16250..17170
DNA (921bp) protein (307aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_948_20
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17322..17570
DNA (249bp) protein (83aa)
Carbon storage regulator homolog n=1 Tax=Congregibacter litoralis KT71 RepID=A4ACW6_9GAMM
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167, ECO:0000256|SAAS:SAAS00093889}; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Congregibacter.;" source="Congregibacter litoralis KT71.;"
csrA1; carbon storage regulator
SCNpilot_expt_1000_bf_scaffold_948_21
unknown

Not on your lists

17709..18086
DNA (378bp) protein (126aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_948_22
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18156..18806
DNA (651bp) protein (217aa)
Uncharacterized protein id=2988828 bin=GWF1_Xanthomonadales_69_6 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
hypothetical protein
Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_expt_1000_bf_scaffold_948_23
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18819..19148
DNA (330bp) protein (110aa)
Uncharacterized protein id=2988826 bin=GWF1_Xanthomonadales_69_6 species=Methylophilales bacterium HTCC2181 genus=unknown taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Heavy metal transport/detoxification protein
Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_expt_1000_bf_scaffold_948_24
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19141..19539
DNA (399bp) protein (133aa)
Putative uncharacterized protein id=2988822 bin=GWF1_Xanthomonadales_69_6 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_expt_1000_bf_scaffold_948_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19892..20545
DNA (654bp) protein (218aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Rhodanobacter denitrificans RepID=M4NCR4_9GAMM
methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGG88454.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_948_26
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20611..21840
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI000370B9EB
chrA; chromate transporter
Chromate transporter {ECO:0000313|EMBL:CCJ05867.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_expt_1000_bf_scaffold_948_27
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21905..22255)
DNA (351bp) protein (117aa)
Uncharacterized protein n=2 Tax=Marinobacter RepID=H8W7K2_MARHY
Uncharacterized protein {ECO:0000313|EMBL:KFN46193.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_948_28
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22252..22617)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ELZ5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV05764.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_948_29
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22708..23142
DNA (435bp) protein (145aa)
MerR family transcriptional regulator n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZH17_9BRAD
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:BAM93112.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_expt_1000_bf_scaffold_948_30
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23151..23465
DNA (315bp) protein (105aa)
UPF0060 membrane protein NT2_06_02200 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YM57_9SPHN
UPF0060 membrane protein NI18_00395 {ECO:0000256|HAMAP-Rule:MF_00010}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein; K09771 hypothetical protein
Displaying items 1-30 of 47 in total

View Taxonomy