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SCNpilot_expt_1000_bf_scaffold_5138

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5138_1
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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244..834
DNA (591bp) protein (197aa)
Resolvase n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3A891_PSEAI
Resolvase {ECO:0000313|EMBL:AJW29847.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. LM16.;"
resolvase site-specific recombinase
SCNpilot_expt_1000_bf_scaffold_5138_2
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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881..1180
DNA (300bp) protein (100aa)
Resolvase, N terminal domain protein n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XMK2_9XANT
Resolvase, N terminal domain protein {ECO:0000313|EMBL:CCF70432.1}; TaxID=1085630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. punicae str. LMG 859.;"
SCNpilot_expt_1000_bf_scaffold_5138_3
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1928..2197
DNA (270bp) protein (90aa)
Plasmid segregation protein ParG n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XMK5_9XANT
Plasmid segregation protein ParG {ECO:0000313|EMBL:CCF70435.1}; TaxID=1085630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. punicae str. LMG 859.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5138_4
unknown

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2240..2443
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5138_5
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2455..3465
DNA (1011bp) protein (337aa)
Replication protein n=1 Tax=Salmonella enterica subsp. enterica serovar Westhampton RepID=B7NZZ9_SALET
Replication protein {ECO:0000313|EMBL:ACJ65160.1}; TaxID=356621 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Westhampton.;"
RepA
SCNpilot_expt_1000_bf_scaffold_5138_6
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4460..4795)
DNA (336bp) protein (112aa)
Transcriptional regulator, TraR/DksA family n=3 Tax=Proteobacteria RepID=B9MIL7_ACIET
TraR/DksA family transcriptional regulator; K06204 DnaK suppressor protein
Transcriptional regulator, TraR/DksA family {ECO:0000313|EMBL:ACM33033.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_expt_1000_bf_scaffold_5138_7
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4812..5534)
DNA (723bp) protein (241aa)
UspA domain protein n=4 Tax=Proteobacteria RepID=B9MIL8_ACIET rbh
uspa domain-containing protein rbh
UspA domain protein {ECO:0000313|EMBL:ACM33034.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_expt_1000_bf_scaffold_5138_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5497..6432)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4ML03_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK89893.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein; K07221 phosphate-selective porin OprO and OprP
SCNpilot_expt_1000_bf_scaffold_5138_9
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6440..6871)
DNA (432bp) protein (144aa)
Pep1 n=3 Tax=root RepID=Q79BP1_ENTAE
Cupin {ECO:0000313|EMBL:EYC52143.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
cupin
SCNpilot_expt_1000_bf_scaffold_5138_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7209..8156
DNA (948bp) protein (316aa)
LysR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4ML05_9BURK rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EIK89895.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
LysR family transcriptional regulator; K03566 LysR family transcriptional regulator, glycine cleavage system transcriptional activator rbh
SCNpilot_expt_1000_bf_scaffold_5138_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8197..9936)
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4ML06_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK89896.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
Displaying 11 items

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