name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_233_1
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
522..1487
|
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B3EB7E
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:AAT88215.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
|
|
SCNpilot_expt_1000_bf_scaffold_233_2
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
1484..2500
|
haloacid dehalogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003753DFE
Predicted sugar phosphatase of the HAD superfamily {ECO:0000313|EMBL:CDK00440.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_233_3
unknown
|
Not on your lists |
2497..2673
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_233_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
2666..3481
|
16S/23S rRNA (Cytidine-2'-O)-methyltransferase TlyA {ECO:0000313|EMBL:KJL36394.1}; EC=2.1.1.226 {ECO:0000313|EMBL:KJL36394.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
tlyA; hemolysin; K06442 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036991C3
|
|
SCNpilot_expt_1000_bf_scaffold_233_5
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(3486..4163)
|
Uncharacterized protein n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BIT0_SANKS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ20122.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
|
|
SCNpilot_expt_1000_bf_scaffold_233_6
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
4303..5247
|
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23); K00858 NAD+ kinase [EC:2.7.1.23] id=7721273 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
inorganic polyphosphate/ATP-NAD kinase
|
|
SCNpilot_expt_1000_bf_scaffold_233_7
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
5244..6944
|
DNA repair protein RecN n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B3D9C5
DNA repair protein RecN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
|
|
SCNpilot_expt_1000_bf_scaffold_233_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
6992..8737
|
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] id=7721270 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
CTP synthetase
|
|
SCNpilot_expt_1000_bf_scaffold_233_9
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
8742..9329
|
nudix hydrolase; K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13]
Putative nudix hydrolase n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RHE9_CLAMS
Putative nudix hydrolase {ECO:0000313|EMBL:CAQ01366.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;"
|
|
SCNpilot_expt_1000_bf_scaffold_233_10
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
9316..10314
|
Tyrosine recombinase XerD n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T570_LEIAQ
rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;"
xerD; site-specific tyrosine recombinase XerD; K04763 integrase/recombinase XerD
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_233_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
10433..11326
|
chromosome partitioning ATPase n=1 Tax=Humibacter albus RepID=UPI0003B41C5B
rbh
Putative sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:ERK69863.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
parA; chromosome partitioning protein; K03496 chromosome partitioning protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_233_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
11362..12189
|
chromosome segregation protein ScpA n=1 Tax=Agromyces subbeticus RepID=UPI0003B47086
ScpA/B protein {ECO:0000313|EMBL:ERK69864.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_233_13
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
12179..12769
|
putative transcriptional regulator; K06024 segregation and condensation protein B id=7721265 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
chromosome condensation and segregation protein B
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis NCPPB 2581.;"
|
|
SCNpilot_expt_1000_bf_scaffold_233_14
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
12766..13566
|
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
rsuA; RNA pseudouridine synthase; K06183 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Pseudouridine synthase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KBW5_9MICO
|
|
SCNpilot_expt_1000_bf_scaffold_233_15
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
13563..14654
|
tyrA; prephenate dehydrogenase (EC:1.3.1.12); K04517 prephenate dehydrogenase [EC:1.3.1.12] id=7721263 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
prephenate dehydrogenase; K04517 prephenate dehydrogenase [EC:1.3.1.12]
Contig_49, whole genome shotgun sequence {ECO:0000313|EMBL:KIU02632.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
|
|
SCNpilot_expt_1000_bf_scaffold_233_16
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
14651..15334
|
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;"
Cytidylate kinase n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BDJ2_9MICO
|
|
SCNpilot_expt_1000_bf_scaffold_233_17
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
15346..16902
|
GTP-binding protein Der n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B704F1
rbh
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
GTP-binding protein EngA
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_233_18
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(17098..18582)
|
Putative drug resistance transporter n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XN33_MICPN
rbh
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:CCH76095.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
putative drug resistance transporter
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_233_19
Gordonia polyisoprenivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
18654..19235
|
Putative TetR family transcriptional regulator n=1 Tax=Gordonia polyisoprenivorans NBRC 16320 RepID=H0RKJ8_9ACTO
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:GAB25599.1}; TaxID=1077976 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia polyisoprenivorans NBRC 16320 = JCM 10675.;"
TetR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_233_20
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
19299..20252
|
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
malate/lactate dehydrogenase; K00016 L-lactate dehydrogenase [EC:1.1.1.27]
lactate dehydrogenase n=1 Tax=Microbacterium yannicii RepID=UPI00030D621C
|
|
SCNpilot_expt_1000_bf_scaffold_233_21
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(20262..20834)
|
HhH-GPD superfamily base excision DNA repair protein {ECO:0000313|EMBL:KJL30379.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
HhH-GPD family protein id=7721251 bin=CNBR_ACT species=Microbacterium laevaniformans genus=Microbacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
HhH-GPD family protein
|
|
SCNpilot_expt_1000_bf_scaffold_233_22
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(20845..23205)
|
ABC transporter n=1 Tax=Leifsonia sp. 109 RepID=UPI000375E8D8
rbh
ABC transporter related protein {ECO:0000313|EMBL:AEE44433.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
ABC transporter-like protein
|
|
SCNpilot_expt_1000_bf_scaffold_233_23
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
23314..24480
|
Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XMS1_9MICO
rbh
Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAD34370.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
NMT1/THI5 like domain-containing protein
|
|
SCNpilot_expt_1000_bf_scaffold_233_24
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
24482..25309
|
Nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XA33_9MICO
rbh
Nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAD34371.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_233_25
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
25311..26135
|
Nitrate/sulfonate/bicarbonate ABC transporter permease protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XN85_9MICO
rbh
Nitrate/sulfonate/bicarbonate ABC transporter permease protein {ECO:0000313|EMBL:GAD34372.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
binding-protein-dependent transport system inner membrane protein
|
|
SCNpilot_expt_1000_bf_scaffold_233_26
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
26658..27011
|
Nitrate/sulfonate/bicarbonate ABC transporter permease protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YUT2_9MICO
Nitrate/sulfonate/bicarbonate ABC transporter permease protein {ECO:0000313|EMBL:GAD34373.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
ABC transporter permease
|
|
SCNpilot_expt_1000_bf_scaffold_233_27
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
27095..27535
|
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030F8127
Uncharacterized protein {ECO:0000313|EMBL:KGJ71933.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
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|
SCNpilot_expt_1000_bf_scaffold_233_28
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(27552..28076)
|
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
aptA; adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7]
adenine phosphoribosyltransferase n=1 Tax=Agromyces italicus RepID=UPI0003B3F752
|
|
SCNpilot_expt_1000_bf_scaffold_233_29
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
comp(28114..29301)
|
Kynureninase {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800}; EC=3.7.1.3 {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800};; L-kynurenine hydrolase {ECO:0000256|HAMAP-Rule:MF_01970}; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
Kynureninase id=7720333 bin=CNBR_ACT species=Actinoplanes sp. genus=Actinoplanes taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
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|
SCNpilot_expt_1000_bf_scaffold_233_30
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
29340..29582
|
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI00037D611A
Uncharacterized protein {ECO:0000313|EMBL:KJL36914.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
|