name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_27_1
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..1088)
|
Conjugation TrbI-like protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NCZ8_9SPHN
Conjugation TrbI-like protein {ECO:0000313|EMBL:EAT08742.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10
|
|
SCNpilot_expt_1000_bf_scaffold_27_2
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1088..2098)
|
Conjugal transfer protein TrbG/VirB9/CagX n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NCZ9_9SPHN
Conjugal transfer protein TrbG/VirB9/CagX {ECO:0000313|EMBL:EAT08741.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
P-type conjugative transfer protein TrbG; K03204 type IV secretion system protein VirB9
|
|
SCNpilot_expt_1000_bf_scaffold_27_3
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2095..2778)
|
Conjugal transfer protein TrbF n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ILW3_9SPHN
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5
Conjugal transfer protein TrbF {ECO:0000313|EMBL:EQB03096.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
|
|
SCNpilot_expt_1000_bf_scaffold_27_4
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2785..4125)
|
P-type conjugative transfer protein TrbL n=2 Tax=Sphingomonas wittichii RepID=A5VCM7_SPHWW
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL
P-type conjugative transfer protein TrbL {ECO:0000313|EMBL:ABQ70043.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
|
|
SCNpilot_expt_1000_bf_scaffold_27_5
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4122..4529)
|
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GSJ6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB02933.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_27_6
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4543..5262)
|
Conjugal transfer protein TrbJ n=1 Tax=Sphingobium baderi LL03 RepID=T0HZJ4_9SPHN
rbh
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:EQB02934.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
conjugal transfer protein TrbJ
|
|
SCNpilot_expt_1000_bf_scaffold_27_7
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5259..7748)
|
Conjugal transfer protein TrbE n=1 Tax=Sphingobium baderi LL03 RepID=T0HUG1_9SPHN
rbh
Conjugal transfer protein TrbE {ECO:0000313|EMBL:EQB02935.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
conjugal transfer ATPase TrbE
|
|
SCNpilot_expt_1000_bf_scaffold_27_8
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7745..8026)
|
Conjugal transfer protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GGS8_9SPHN
Conjugal transfer protein {ECO:0000313|EMBL:EQB02936.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
type IV secretory pathway, VirB3 family protein; K03198 type IV secretion system protein VirB3
|
|
SCNpilot_expt_1000_bf_scaffold_27_9
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8023..8391)
|
Conjugal transfer protein TrbC n=1 Tax=Sphingobium baderi LL03 RepID=T0GQI8_9SPHN
Conjugal transfer protein TrbC {ECO:0000313|EMBL:EQB02937.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
conjugal transfer protein TrbC
|
|
SCNpilot_expt_1000_bf_scaffold_27_10
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8388..9326)
|
Conjugal transfer protein TrbB n=1 Tax=Sphingobium baderi LL03 RepID=T0GSK2_9SPHN
Conjugal transfer protein TrbB {ECO:0000313|EMBL:EQB02938.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
P-type conjugative transfer ATPase TrbB; K03196 type IV secretion system protein VirB11
|
|
SCNpilot_expt_1000_bf_scaffold_27_11
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9604..10032)
|
CopG family transcripitonal regulator n=1 Tax=Sphingobium baderi LL03 RepID=T0GGT3_9SPHN
CopG family transcripitonal regulator {ECO:0000313|EMBL:EQB02941.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
helix-turn-helix domain-containing protein
|
|
SCNpilot_expt_1000_bf_scaffold_27_12
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10042..12024)
|
Conjugal transfer protein TraG n=1 Tax=Sphingobium baderi LL03 RepID=T0GQJ1_9SPHN
rbh
Conjugal transfer protein TraG {ECO:0000313|EMBL:EQB02942.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
conjugal transfer coupling protein TraG
|
|
SCNpilot_expt_1000_bf_scaffold_27_13
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12040..13779)
|
Type VI secretion protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GSK6_9SPHN
rbh
Type VI secretion protein {ECO:0000313|EMBL:EQB02943.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_27_14
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14033..14599)
|
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HZK1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB02944.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_27_15
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14596..15291)
|
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HUG8_9SPHN
rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB02945.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
lytic transglycosylase subunit
|
|
SCNpilot_expt_1000_bf_scaffold_27_16
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15296..15640)
|
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GGT8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB02946.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_27_17
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15676..16023)
|
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489872
Uncharacterized protein {ECO:0000313|EMBL:EQB02947.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_27_18
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16004..16582)
|
conjugal transfer protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00035CD3CD
Conjugal transfer protein {ECO:0000313|EMBL:EAT08724.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
Type IV secretory pathway protease TraF-like protein
|
|
SCNpilot_expt_1000_bf_scaffold_27_19
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16579..17166)
|
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HZK4_9SPHN
rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB02949.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_27_20
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17163..18509)
|
Cytosine-specific methyltransferase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B6W9_PARDP
rbh
Uncharacterized protein {ECO:0000313|EMBL:EZQ17751.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
|
|
SCNpilot_expt_1000_bf_scaffold_27_21
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18506..19654)
|
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GGS4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB02931.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
phosphoadenosine phosphosulfate reductase
|
|
SCNpilot_expt_1000_bf_scaffold_27_22
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19959..20840)
|
RepA replication protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GSL6_9SPHN
rbh
RepA replication protein {ECO:0000313|EMBL:EQB02953.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
putative replication protein A
|
|
SCNpilot_expt_1000_bf_scaffold_27_23
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20837..21103)
|
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HZK7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB02954.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_27_24
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21237..21809)
|
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HUH6_9SPHN
rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB02955.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_27_25
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22154..22420)
|
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GGU4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB02956.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_27_26
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22913..23206)
|
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HZE8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB02874.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_27_27
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23272..23880)
|
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
DNA-methyltransferase n=1 Tax=Sphingobium baderi LL03 RepID=T0HUC0_9SPHN
DNA methylase N-4/N-6 domain-containing protein
|
|
SCNpilot_expt_1000_bf_scaffold_27_28
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24225..24617)
|
UPI0003D632DB related cluster n=1 Tax=unknown RepID=UPI0003D632DB
Uncharacterized protein {ECO:0000313|EMBL:AKH43040.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
|
|
SCNpilot_expt_1000_bf_scaffold_27_29
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24786..25139)
|
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GQE7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB02877.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_27_30
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25472..25747)
|
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GSE9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB02878.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
|