name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_352_1
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(182..1084)
|
Nitrilase {ECO:0000313|EMBL:BAK66434.1}; EC=3.5.5.1 {ECO:0000313|EMBL:BAK66434.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Nitrilase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISS4_9SPHN
nitrilase
|
|
SCNpilot_expt_1000_bf_scaffold_352_2
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1081..1674)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISS5_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66435.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_352_3
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1671..2096)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISS6_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66436.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_352_4
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2189..3304
|
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Alanine dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISS7_9SPHN
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_352_5
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3447..3668)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISS8_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66438.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_352_6
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3758..4237)
|
rppH; RNA pyrophosphohydrolase; K08311 putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
RNA pyrophosphohydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISS9_9SPHN
|
|
SCNpilot_expt_1000_bf_scaffold_352_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4403..6274
|
2-oxoglutarate oxidoreductase, alpha subunit {ECO:0000313|EMBL:GAO55672.1}; EC=1.2.7.3 {ECO:0000313|EMBL:GAO55672.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
pyruvate flavodoxin/ferredoxin oxidoreductase-like; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3]
Pyruvate flavodoxin/ferredoxin oxidoreductase-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7H6_NOVAD
|
|
SCNpilot_expt_1000_bf_scaffold_352_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6271..7332
|
2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3]
2-oxoacid ferredoxin oxidoreductase subunit beta n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B308BE
2-oxoglutarate ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:ENY80015.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
|
|
SCNpilot_expt_1000_bf_scaffold_352_9
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7705..8697
|
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZRM4_9SPHN
rbh
Uncharacterized protein {ECO:0000313|EMBL:AKH41348.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
membrane-bound metal-dependent hydrolase; K09151 hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_352_10
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8912..10216
|
cyclopropane-fatty-acyl-phospholipid synthase; K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IST2_9SPHN
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:BAK66442.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_352_11
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10226..12586)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IST3_9SPHN
rbh
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66443.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_352_12
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12627..13337)
|
Putative metal-dependent hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IST4_9SPHN
rbh
putative metal-dependent hydrolase; K06896
rbh
Putative metal-dependent hydrolase {ECO:0000313|EMBL:BAK66444.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_352_13
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13421..14788
|
DNA repair protein radA n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IST6_9SPHN
rbh
radA; DNA repair protein RadA; K04485 DNA repair protein RadA/Sms
rbh
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_352_14
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14798..15352
|
Membrane protein required for colicin V production n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IST7_9SPHN
membrane protein required for colicin V production; K03558 membrane protein required for colicin V production
Membrane protein required for colicin V production {ECO:0000313|EMBL:BAK66447.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_352_15
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15342..15806
|
NifU-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IST8_9SPHN
NifU-like protein
NifU-like protein {ECO:0000313|EMBL:BAK66448.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_352_16
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15799..17604
|
Putative glutathione-regulated potassium-efflux system protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IST9_9SPHN
putative glutathione-regulated potassium-efflux system protein; K11747 glutathione-regulated potassium-efflux system protein KefB
Putative glutathione-regulated potassium-efflux system protein {ECO:0000313|EMBL:BAK66449.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_352_17
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17601..17957
|
Putative uncharacterized protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EV61_SPHCR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG48811.1}; Flags: Precursor;; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum L-1.;"
|
|
SCNpilot_expt_1000_bf_scaffold_352_18
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17965..19068)
|
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
3-dehydroquinate synthase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISU1_9SPHN
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_352_19
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19065..19664)
|
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Shikimate kinase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISU2_9SPHN
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_352_20
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19698..19871
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISU3_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66453.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_352_21
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19880..21724
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISU4_9SPHN
rbh
hypothetical protein
rbh
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66454.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_352_22
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21721..22650
|
Tyrosine recombinase XerC n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISU5_9SPHN
rbh
xerD; tyrosine recombinase XerD; K04763 integrase/recombinase XerD
rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_352_23
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22660..23601
|
accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha; K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2]
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISU6_9SPHN
|
|
SCNpilot_expt_1000_bf_scaffold_352_24
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23684..25168
|
Peptidase M48 family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISU7_9SPHN
rbh
peptidase M48 family protein
rbh
Peptidase M48 family protein {ECO:0000313|EMBL:BAK66457.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_352_25
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25258..25428)
|
Putative pilin Flp n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISU8_9SPHN
Component of type 4 pilus pilin subunit protein {ECO:0000313|EMBL:KEQ55301.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
putative pilin Flp; K02651 pilus assembly protein Flp/PilA
|
|
SCNpilot_expt_1000_bf_scaffold_352_26
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25558..25728)
|
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000316ADCE
Uncharacterized protein {ECO:0000313|EMBL:CCW17584.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
putative pilin Flp; K02651 pilus assembly protein Flp/PilA
|
|
SCNpilot_expt_1000_bf_scaffold_352_27
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25810..26226
|
CTP pyrophosphohydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISV0_9SPHN
CTP pyrophosphohydrolase
CTP pyrophosphohydrolase {ECO:0000313|EMBL:BAK66460.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_352_28
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26240..27088)
|
Putative methyltransferase {ECO:0000313|EMBL:BAK66461.1}; EC=2.1.1.- {ECO:0000313|EMBL:BAK66461.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Putative methyltransferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISV1_9SPHN
putative methyltransferase
|
|
SCNpilot_expt_1000_bf_scaffold_352_29
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27133..27879
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISV2_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66462.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_352_30
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27938..28195
|
Glutaredoxin 3 n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISV3_9SPHN
glutaredoxin 3; K03676 glutaredoxin 3
Glutaredoxin 3 {ECO:0000313|EMBL:BAK66463.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|