name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_422_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(265..1047)
|
Levodione reductase {ECO:0000313|EMBL:AKH43190.1}; EC=1.1.1.- {ECO:0000313|EMBL:AKH43190.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
LinC-like SDR-family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITG9_9SPHN
LinC-like SDR-family protein
|
|
SCNpilot_expt_1000_bf_scaffold_422_2
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1044..1265)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITH0_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66680.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_422_3
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1262..2824)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITH1_9SPHN
rbh
hypothetical protein
rbh
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66681.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_422_4
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2835..3980)
|
Putative hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITH2_9SPHN
rbh
putative hydrolase
rbh
Putative hydrolase {ECO:0000313|EMBL:BAK66682.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_422_5
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3995..4750)
|
LinC-like SDR-family protein; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
LinC-like SDR-family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITH3_9SPHN
LinC-like SDR-family protein {ECO:0000313|EMBL:BAK66683.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_422_6
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4747..5157)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITH4_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66684.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_422_7
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5154..5636)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITH5_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66685.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_422_8
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5650..6036)
|
pcaC; 4-carboxymuconolactone decarboxylase; K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:BAK66686.1}; EC=4.1.1.44 {ECO:0000313|EMBL:BAK66686.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
4-carboxymuconolactone decarboxylase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITH6_9SPHN
|
|
SCNpilot_expt_1000_bf_scaffold_422_9
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6049..7260)
|
Putative hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITH7_9SPHN
rbh
putative hydrolase
rbh
Putative hydrolase {ECO:0000313|EMBL:BAK66687.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_422_10
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7361..8254)
|
3-hydroxyisobutyrate dehydrogenase-related protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITH8_9SPHN
3-hydroxyisobutyrate dehydrogenase
3-hydroxyisobutyrate dehydrogenase-related protein {ECO:0000313|EMBL:BAK66688.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_422_11
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8251..9063)
|
Putative hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITH9_9SPHN
rbh
putative hydrolase
rbh
Putative hydrolase {ECO:0000313|EMBL:BAK66689.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_422_12
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9060..10241)
|
Putative cytochrome P450 n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITI0_9SPHN
rbh
cytochrome P450
rbh
Putative cytochrome P450 {ECO:0000313|EMBL:BAK66690.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_422_13
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10241..11140)
|
Putative hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITI1_9SPHN
rbh
putative hydrolase
rbh
Putative hydrolase {ECO:0000313|EMBL:BAK66691.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_422_14
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11172..12812)
|
Putative oxidoreductase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITI2_9SPHN
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAK66692.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_422_15
unknown
|
Not on your lists |
comp(12920..13057)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_422_16
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13127..13900)
|
Putative hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITI4_9SPHN
rbh
putative hydrolase; K06167 PhnP protein
rbh
Putative hydrolase {ECO:0000313|EMBL:BAK66694.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_422_17
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13905..14690)
|
Mg-dependent DNase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITI5_9SPHN
rbh
Mg-dependent DNase {ECO:0000313|EMBL:BAK66695.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_422_18
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14690..16255)
|
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Methionine--tRNA ligase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITI6_9SPHN
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_422_19
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16631..18073)
|
leuC; 3-isopropylmalate dehydratase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
rbh
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
3-isopropylmalate dehydratase large subunit n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISF3_9SPHN
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_422_20
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18115..19389)
|
Major facilitator superfamily protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISF2_9SPHN
rbh
major facilitator superfamily protein
rbh
Major facilitator superfamily protein {ECO:0000313|EMBL:BAK66312.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_422_21
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19487..20185)
|
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAW4_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHS46907.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_422_22
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20307..21119)
|
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Methionine aminopeptidase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RZX3_9SPHN
rbh
methionine aminopeptidase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_422_23
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21088..21294)
|
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SEN8_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXS70019.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
|
|
SCNpilot_expt_1000_bf_scaffold_422_24
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21635..22285)
|
3-oxoacid CoA-transferase, B subunit {ECO:0000313|EMBL:EZP69966.1}; EC=2.8.3.5 {ECO:0000313|EMBL:EZP69966.1};; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
scoB; 3-oxoacid CoA-transferase subunit B (EC:2.8.3.5); K01029 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
rbh
succinyl-CoA:3-ketoacid-CoA transferase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6C6F9
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_422_25
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22285..23034)
|
scoA; 3-oxoacid CoA-transferase subunit A; K01028 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
3-oxoacid CoA-transferase subunit A {ECO:0000313|EMBL:BAK66310.1}; EC=2.8.3.5 {ECO:0000313|EMBL:BAK66310.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
3-oxoacid CoA-transferase subunit A n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISF0_9SPHN
|
|
SCNpilot_expt_1000_bf_scaffold_422_26
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23215..23397)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISE6_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66306.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_422_27
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23504..24508)
|
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
Thiazole synthase n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CTF6_SPHYA
rbh
thiS_thiG; thiazole biosynthesis protein ThiS/ThiG; K03149 thiamine biosynthesis ThiG
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_422_28
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24597..25040
|
3-dehydroquinate dehydratase; K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10]
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
3-dehydroquinate dehydratase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISE4_9SPHN
|
|
SCNpilot_expt_1000_bf_scaffold_422_29
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25380..25859
|
Acetyl-CoA carboxylase biotin carboxyl carrier protein {ECO:0000313|EMBL:BAK66303.1}; EC=6.4.1.2 {ECO:0000313|EMBL:BAK66303.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Acetyl-CoA carboxylase biotin carboxyl carrier protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISE3_9SPHN
accB; acetyl-CoA carboxylase biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein
|
|
SCNpilot_expt_1000_bf_scaffold_422_30
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25873..27225
|
accC; acetyl-CoA carboxylase biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
Acetyl-CoA carboxylase biotin carboxylase {ECO:0000313|EMBL:BAK66302.1}; EC=6.3.4.14 {ECO:0000313|EMBL:BAK66302.1};; EC=6.4.1.2 {ECO:0000313|EMBL:BAK66302.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Acetyl-CoA carboxylase biotin carboxylase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISE2_9SPHN
|