name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_439_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..418)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5N4_9BRAD
Site-specific tyrosine recombinase XerD {ECO:0000313|EMBL:CEG10253.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
putative integrase
|
|
SCNpilot_expt_1000_bf_scaffold_439_2
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(936..2498)
|
Uncharacterized protein n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1YXD4_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:ERI15336.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_439_3
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2546..3043
|
Transcriptional regulator, MarR family n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P6G0_9DELT
MarR family transcriptional regulator {ECO:0000313|EMBL:ETR74908.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_439_4
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3372..3800)
|
Putative Rrf2 family DNA binding protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ22_9SPHN
putative Rrf2 family DNA binding protein
Putative Rrf2 family DNA binding protein {ECO:0000313|EMBL:BAK67192.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_439_5
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3913..4692
|
Putative methyltransferase {ECO:0000313|EMBL:BAK67193.1}; EC=2.1.1.- {ECO:0000313|EMBL:BAK67193.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Putative methyltransferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ23_9SPHN
rbh
putative methyltransferase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_439_6
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4937..5422)
|
MarR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ09_9SPHN
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:BAK67179.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_439_7
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5502..6344
|
Feruloyl-CoA hydratase/lyase n=2 Tax=Sphingomonadaceae RepID=G2IJ08_9SPHN
ferB; feruloyl-CoA hydratase/lyase
Feruloyl-CoA hydratase/lyase {ECO:0000313|EMBL:BAK67178.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_439_8
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6388..8517
|
Feruloyl-CoA synthetase n=2 Tax=Sphingomonadaceae RepID=G2IJ07_9SPHN
rbh
Feruloyl-CoA synthetase {ECO:0000313|EMBL:BAB86294.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
ferA; feruloyl-CoA synthetase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_439_9
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8856..9575
|
Putative hydrolase n=2 Tax=Sphingomonadaceae RepID=G2IJ06_9SPHN
rbh
putative hydrolase
rbh
Putative hydrolase {ECO:0000313|EMBL:BAK67176.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_439_10
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9629..11017
|
Syringate O-demethylase n=2 Tax=Sphingomonadaceae RepID=G2IJ05_9SPHN
rbh
desA; syringate O-demethylase
rbh
Syringate O-demethylase {ECO:0000313|EMBL:BAK67175.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_439_11
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11361..11699
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFT1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFL37915.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_439_12
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11705..12115
|
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NMK3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFL37916.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_439_13
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12153..12866
|
RNA polymerase sigma factor n=1 Tax=Methylocystis sp. (strain SC2) RepID=I4EB06_METSZ
rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
|
|
SCNpilot_expt_1000_bf_scaffold_439_14
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12971..13165)
|
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J7X6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB32952.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_439_15
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13168..13491)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ03_9SPHN
hypothetical protein; K11312 cupin 2 domain-containing protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67173.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_439_16
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13491..14237)
|
IclR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ02_9SPHN
IclR family transcriptional regulator
IclR family transcriptional regulator {ECO:0000313|EMBL:BAK67172.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_439_17
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14271..15149)
|
Putative uncharacterized protein n=2 Tax=Sphingomonadaceae RepID=G2IJ01_9SPHN
rbh
hypothetical protein
rbh
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67171.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_439_18
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15378..17819)
|
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIW5_9SPHN
TonB-dependent receptor-like protein
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK67135.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_439_19
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17897..19504)
|
Benzoylformate decarboxylase {ECO:0000313|EMBL:BAK67170.1}; EC=4.1.1.7 {ECO:0000313|EMBL:BAK67170.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Benzoylformate decarboxylase n=2 Tax=Sphingomonadaceae RepID=G2IJ00_9SPHN
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_439_20
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19901..20908)
|
Zn-dependent alcohol dehydrogenase {ECO:0000313|EMBL:BAK67169.1}; EC=1.1.1.- {ECO:0000313|EMBL:BAK67169.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Zn-dependent alcohol dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIZ9_9SPHN
rbh
Zn-dependent alcohol dehydrogenase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_439_21
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20956..22074)
|
Aryl-alcohol dehydrogenase {ECO:0000313|EMBL:BAK67168.1}; EC=1.1.1.90 {ECO:0000313|EMBL:BAK67168.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Aryl-alcohol dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIZ8_9SPHN
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_439_22
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22105..22953)
|
Oxidoreductase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIZ7_9SPHN
rbh
Oxidoreductase {ECO:0000313|EMBL:BAK67167.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
oxidoreductase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_439_23
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23027..23572)
|
2,4'-dihydroxyacetophenone dioxygenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIZ6_9SPHN
rbh
2,4'-dihydroxyacetophenone dioxygenase
rbh
2,4'-dihydroxyacetophenone dioxygenase {ECO:0000313|EMBL:BAK67166.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_439_24
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23641..24042)
|
Glyoxalase-family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIZ5_9SPHN
glyoxalase-family protein
Glyoxalase-family protein {ECO:0000313|EMBL:BAK67165.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_439_25
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24463..27051)
|
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQP3_9SPHN
rbh
Ferripyoverdine receptor {ECO:0000313|EMBL:AKH43199.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
TonB-dependent receptor-like protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_439_26
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27287..28417
|
hypothetical protein; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
rbh
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQP4_9SPHN
rbh
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65916.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_439_27
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28607..29842)
|
Major facilitator superfamily protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQP5_9SPHN
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:BAK65917.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_439_28
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29847..31124)
|
Major facilitator superfamily protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQP5_9SPHN
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:BAK65917.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_439_29
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31194..32054)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQP7_9SPHN
rbh
hypothetical protein
rbh
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65919.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_439_30
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32058..32507)
|
hypothetical protein; K01075 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQP8_9SPHN
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65920.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|