name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_495_1
unknown
|
Not on your lists |
comp(1..192)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_495_2
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(192..458)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IM95_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65350.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
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SCNpilot_expt_1000_bf_scaffold_495_3
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(562..1215)
|
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Endonuclease III n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IM96_9SPHN
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_495_4
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1219..1986)
|
dapB; dihydrodipicolinate reductase; K00215 dihydrodipicolinate reductase [EC:1.3.1.26]
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IM97_9SPHN
|
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SCNpilot_expt_1000_bf_scaffold_495_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2074..2514)
|
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000373E6CA
Uncharacterized protein {ECO:0000313|EMBL:KIO48262.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_495_6
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2668..2886
|
excinuclease ABC subunit C n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036B6BC3
Excinuclease ABC C subunit-like protein {ECO:0000313|EMBL:KFL47074.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
excinuclease ABC subunit C; K07461 putative endonuclease
|
|
SCNpilot_expt_1000_bf_scaffold_495_7
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3048..3749
|
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
NAD-dependent protein deacylase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IM99_9SPHN
rbh
|
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SCNpilot_expt_1000_bf_scaffold_495_8
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3811..4509
|
Putative hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMA0_9SPHN
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAK65355.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_495_9
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4733..4912
|
50S ribosomal protein L32 n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MR51_9SPHN
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
|
|
SCNpilot_expt_1000_bf_scaffold_495_10
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4929..5981
|
plsX; phosphate acyltransferase; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15]
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium
Phosphate acyltransferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMA3_9SPHN
|
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SCNpilot_expt_1000_bf_scaffold_495_11
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5978..6949
|
fabH; 3-oxoacyl-ACP synthase; K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
rbh
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMA4_9SPHN
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_495_12
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7100..7396
|
Integration host factor subunit alpha n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMA5_9SPHN
ihfA; integration host factor subunit alpha; K04764 integration host factor subunit alpha
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_495_13
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7446..7949
|
Putative MerR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMA6_9SPHN
putative MerR family transcriptional regulator
Putative MerR family transcriptional regulator {ECO:0000313|EMBL:BAK65361.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_495_14
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8527..9078)
|
phosphohistidine phosphatase SixA; K08296 phosphohistidine phosphatase [EC:3.1.3.-]
Phosphohistidine phosphatase SixA n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMA7_9SPHN
Phosphohistidine phosphatase SixA {ECO:0000313|EMBL:BAK65362.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_495_15
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9075..11828)
|
Putative ATP-dependent helicase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMA8_9SPHN
rbh
Putative ATP-dependent helicase {ECO:0000313|EMBL:BAK65363.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_495_16
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11919..12308)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMA9_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65364.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_495_17
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12455..14053
|
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Lysine--tRNA ligase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMB0_9SPHN
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_495_18
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14505..14939)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMB1_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65366.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_495_19
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15304..17118)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN49_9SPHN
rbh
hypothetical protein
rbh
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65497.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_495_20
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17273..17710)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN50_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65498.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_495_21
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17893..18582)
|
putative oxygenase; K00472 prolyl 4-hydroxylase [EC:1.14.11.2]
Putative oxygenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN51_9SPHN
Putative oxygenase {ECO:0000313|EMBL:BAK65499.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_495_22
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18722..19705)
|
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J7L1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB32827.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_495_23
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19854..20405)
|
Putative oxidoreductase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN53_9SPHN
rbh
Putative oxidoreductase {ECO:0000313|EMBL:BAK65501.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_495_24
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20706..20912
|
30S ribosomal protein S21 n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN56_9SPHN
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_495_25
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20972..21514
|
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN57_9SPHN
putative peptidyl-prolyl cis-trans isomerase
|
|
SCNpilot_expt_1000_bf_scaffold_495_26
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21993..23174)
|
Hypothetical membrane protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN58_9SPHN
rbh
hypothetical protein
rbh
Hypothetical membrane protein {ECO:0000313|EMBL:BAK65506.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_495_27
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23171..24130)
|
signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89]
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Signal peptidase I n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN59_9SPHN
|
|
SCNpilot_expt_1000_bf_scaffold_495_28
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24127..24528)
|
acpS; holo-[acyl-carrier-protein] synthase; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Holo-[acyl-carrier-protein] synthase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN60_9SPHN
|
|
SCNpilot_expt_1000_bf_scaffold_495_29
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24596..25333)
|
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Pyridoxine 5'-phosphate synthase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN61_9SPHN
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_495_30
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25330..25908)
|
pyrE; orotate phosphoribosyltransferase; K00762 orotate phosphoribosyltransferase [EC:2.4.2.10]
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00078102}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Orotate phosphoribosyltransferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN62_9SPHN
|