ggKbase home page

SCNpilot_expt_1000_bf_scaffold_202

Search features with annotation key words

Displaying items 1-30 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_202_1
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(375..1988)
DNA (1614bp) protein (538aa)
Beta-lactamase id=3267183 bin=GWF2_Bacteroidetes_49_14 species=unknown genus=Maribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab) rbh
beta-lactamase
Tax=GWF2_Bacteroidetes_41_31_curated
SCNpilot_expt_1000_bf_scaffold_202_2
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2401..3492)
DNA (1092bp) protein (364aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H5Y8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB93082.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_202_3
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3721..4245)
DNA (525bp) protein (175aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO75473.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
SCNpilot_expt_1000_bf_scaffold_202_4
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4487..5092)
DNA (606bp) protein (202aa)
CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
CDP-alcohol phosphatidyltransferase n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SAI7_9FLAO rbh
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:KGO97060.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
SCNpilot_expt_1000_bf_scaffold_202_5
unknown

Not on your lists

comp(5299..6135)
DNA (837bp) protein (279aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_202_6
Chlorobium chlorochromatii, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(6177..6848)
DNA (672bp) protein (224aa)
Transcriptional regulator, XRE family n=1 Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3AS47_CHLCH
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABB28178.1}; TaxID=340177 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium chlorochromatii (strain CaD3).;"
SCNpilot_expt_1000_bf_scaffold_202_7
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7155..7706)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003647B0E
Cupin 2 conserved barrel domain protein
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:AFK02100.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
SCNpilot_expt_1000_bf_scaffold_202_8
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7772..8704)
DNA (933bp) protein (311aa)
Helix-turn-helix, AraC domain-containing protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EQZ6_EMTOG
Helix-turn-helix, AraC domain-containing protein
Helix-turn-helix, AraC domain-containing protein {ECO:0000313|EMBL:AFK02099.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
SCNpilot_expt_1000_bf_scaffold_202_9
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8843..9166)
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Algoriphagus machipongonensis RepID=A3HT84_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EAZ83052.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_202_10
unknown

Not on your lists

comp(9138..9338)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_202_11
unknown

Not on your lists

comp(9343..9612)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_202_12
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9970..11520)
DNA (1551bp) protein (517aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037AE574 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV67440.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
SCNpilot_expt_1000_bf_scaffold_202_13
unknown

Not on your lists

comp(11777..12601)
DNA (825bp) protein (275aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_202_14
unknown

Not on your lists

comp(12848..13279)
DNA (432bp) protein (144aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_202_15
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13538..15097)
DNA (1560bp) protein (520aa)
Peptidase S41 n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YI72_9SPHI
Peptidase S41 {ECO:0000313|EMBL:EHQ26507.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
periplasmic protease
SCNpilot_expt_1000_bf_scaffold_202_16
unknown

Not on your lists

comp(15094..15354)
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_202_17
unknown

Not on your lists

comp(15329..15895)
DNA (567bp) protein (189aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_202_18
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16069..16731)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICG9_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA45439.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_1000_bf_scaffold_202_19
unknown

Not on your lists

comp(17037..17564)
DNA (528bp) protein (176aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_202_20
unknown

Not on your lists

comp(17800..18606)
DNA (807bp) protein (269aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_202_21
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18774..19967)
DNA (1194bp) protein (398aa)
Integrase family protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZC0_HALH1
integrase
Integrase family protein {ECO:0000313|EMBL:AEE48415.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_expt_1000_bf_scaffold_202_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20361..20681)
DNA (321bp) protein (107aa)
Thioredoxin n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGH9_NIAKG
thioredoxin; K03671 thioredoxin 1
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_202_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20862..24515)
DNA (3654bp) protein (1218aa)
DNA polymerase III subunit alpha; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
DNA polymerase III, alpha subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGI0_NIAKG
SCNpilot_expt_1000_bf_scaffold_202_24
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24860..27295
DNA (2436bp) protein (812aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B6FE4F rbh
hypothetical protein; K02004 putative ABC transport system permease protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADZ77767.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_expt_1000_bf_scaffold_202_25
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27367..29778
DNA (2412bp) protein (804aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360881D rbh
hypothetical protein; K02004 putative ABC transport system permease protein
Uncharacterized protein {ECO:0000313|EMBL:AEI48367.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_expt_1000_bf_scaffold_202_26
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29939..30604
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GEX1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH52446.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_202_27
unknown

Not on your lists

comp(30758..30991)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_202_28
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

31226..32803
DNA (1578bp) protein (526aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003662815
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB40902.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_expt_1000_bf_scaffold_202_29
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32829..33494
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036EF3AB
Uncharacterized protein {ECO:0000313|EMBL:KFD38299.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Yellowstone.;"
Collagen triple helix repeat-containing protein
SCNpilot_expt_1000_bf_scaffold_202_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34252..39342
DNA (5091bp) protein (1697aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNY8_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02073.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 125 in total

View Taxonomy