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SCNpilot_expt_1000_bf_scaffold_457

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_457_1
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3..482
DNA (480bp) protein (160aa)
DNA-binding protein n=1 Tax=Pedobacter agri RepID=UPI00029A37C7
DNA-binding protein {ECO:0000313|EMBL:KFF04311.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
helix-turn-helix domain-containing protein
SCNpilot_expt_1000_bf_scaffold_457_2
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

615..1283
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000379AB14
Uncharacterized protein {ECO:0000313|EMBL:KIF31968.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
methylase
SCNpilot_expt_1000_bf_scaffold_457_3
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1416..2018)
DNA (603bp) protein (201aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RSS9_LEAB4
filamentation induced by camp protein fic; K04095 cell filamentation protein
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:ADQ15929.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
SCNpilot_expt_1000_bf_scaffold_457_4
GWF2_TM6_33_332, TM6, Bacteria

Not on your lists

comp(2008..2229)
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP52828.1}; TaxID=1619080 species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium GW2011_GWF2_33_332.;"
Putative uncharacterized protein id=1825719 bin=GWE2_Bacteroidetes_42_42 species=Leadbetterella byssophila genus=Leadbetterella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_457_5
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2696..3526)
DNA (831bp) protein (277aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pedobacter sp. BAL39 RepID=A6E7M9_9SPHI rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KFF23284.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_expt_1000_bf_scaffold_457_6
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3643..4362)
DNA (720bp) protein (240aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W5N7_9FLAO rbh
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFK35290.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_1000_bf_scaffold_457_7
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4379..4873)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CGX7_9FLAO
Membrane protein {ECO:0000313|EMBL:KEQ29025.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
transmembrane protein
SCNpilot_expt_1000_bf_scaffold_457_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4901..5317)
DNA (417bp) protein (139aa)
Peroxiredoxin, OsmC subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAF3_NIAKG
OsmC subfamily peroxiredoxin; K04063 osmotically inducible protein OsmC
Peroxiredoxin, OsmC subfamily {ECO:0000313|EMBL:AEV98115.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_457_9
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5404..6252)
DNA (849bp) protein (283aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KE49_9FLAO rbh
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJL71443.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
helix-turn-helix domain-containing protein rbh
SCNpilot_expt_1000_bf_scaffold_457_10
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6308..6514)
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC22831.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
SCNpilot_expt_1000_bf_scaffold_457_11
Leptospira noguchii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(6496..7419)
DNA (924bp) protein (308aa)
Leucine rich repeat protein n=1 Tax=Leptospira noguchii str. 2001034031 RepID=M6Y0A4_9LEPT
Leucine rich repeat protein {ECO:0000313|EMBL:EMO87120.1}; TaxID=1193053 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira noguchii str. 2001034031.;"
lipoprotein
SCNpilot_expt_1000_bf_scaffold_457_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7859..9421)
DNA (1563bp) protein (521aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000367C7A6 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF17587.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
propeptide PepSY amd peptidase M4
SCNpilot_expt_1000_bf_scaffold_457_13
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9443..9850)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CBY3_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ81556.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_expt_1000_bf_scaffold_457_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9863..12394)
DNA (2532bp) protein (844aa)
TonB-denpendent receptor n=1 Tax=Niabella aurantiaca RepID=UPI00036BE08E
TonB-denpendent receptor {ECO:0000313|EMBL:AHF15461.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
tonb-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_expt_1000_bf_scaffold_457_15
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13047..16133)
DNA (3087bp) protein (1029aa)
Putative transmembrane protein n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7XKG5_9BACT
Membrane-bound dehydrogenase domain-containing protein {ECO:0000313|EMBL:AHM63031.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
membrane-bound dehydrogenase domain-containing protein rbh
SCNpilot_expt_1000_bf_scaffold_457_16
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16469..16657)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZRR9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGJ72008.1}; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis DSM 18011.;"
membrane protein
SCNpilot_expt_1000_bf_scaffold_457_17
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16650..17264)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1LK00_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKB57070.1}; TaxID=883098 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum CCUG 30536.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_457_18
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17303..17509)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FRV9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI94324.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_457_19
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17585..18034)
DNA (450bp) protein (150aa)
Putative redox protein, regulator of disulfide bond formation n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXJ4_SOLCM
putative redox protein, regulator of disulfide bond formation
Putative redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:AFD05290.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_expt_1000_bf_scaffold_457_20
unknown

Not on your lists

comp(18342..18716)
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_457_21
unknown

Not on your lists

18847..19230
DNA (384bp) protein (128aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_457_22
Bacteriovorax sp. DB6_IX, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19240..21882)
DNA (2643bp) protein (881aa)
Aminotransferase, class III n=1 Tax=Bacteriovorax sp. DB6_IX RepID=T0R894_9DELT rbh
Aminotransferase, class III {ECO:0000313|EMBL:EQC43151.1}; TaxID=1353530 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. DB6_IX.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_457_23
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(21857..23086)
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI0003738C9F
hypothetical protein
Tax=RIFOXYC12_FULL_TA06_54_24_curated
SCNpilot_expt_1000_bf_scaffold_457_24
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(23083..24609)
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S7I9_9FLAO rbh
radical sam domain-containing protein
Tax=RIFOXYC12_FULL_TA06_54_24_curated
SCNpilot_expt_1000_bf_scaffold_457_25
Bacillus cellulosilyticus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24611..25945)
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003723B01
cytochrome P450
Cytochrome P450 {ECO:0000313|EMBL:ADU32117.1}; TaxID=649639 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141; / JCM 9156 / N-4).;"
SCNpilot_expt_1000_bf_scaffold_457_26
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25960..27294)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S8C3_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:KGO95651.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
radical sam domain-containing protein rbh
SCNpilot_expt_1000_bf_scaffold_457_27
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

27476..28585
DNA (1110bp) protein (370aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XQ82_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EHO43387.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_457_28
unknown

Not on your lists

comp(28591..29157)
DNA (567bp) protein (189aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_457_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29172..30179)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPX4_NIAKG
hypothetical protein; K09151 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99968.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_457_30
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30657..33227)
DNA (2571bp) protein (857aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036AC83D rbh
TonB-dependent receptor {ECO:0000313|EMBL:KIC89744.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
TonB-dependent receptor rbh
Displaying items 1-30 of 48 in total

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