ggKbase home page

SCNpilot_expt_1000_bf_scaffold_530

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_530_1
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

209..2617
DNA (2409bp) protein (803aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2G2_PALPW
Uncharacterized protein {ECO:0000313|EMBL:KIA94342.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
SCNpilot_expt_1000_bf_scaffold_530_2
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2770..6369)
DNA (3600bp) protein (1200aa)
Chromosome partition protein Smc n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6T4_NIAKG rbh
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
condensin subunit Smc; K03529 chromosome segregation protein rbh
SCNpilot_expt_1000_bf_scaffold_530_3
unknown

Not on your lists

6770..6958
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_530_4
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6999..7187)
DNA (189bp) protein (63aa)
Putative uncharacterized protein id=4190330 bin=GWF2_Bacteroidetes_33_38 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein
Tax=GWF2_Bacteroidetes_33_38_curated
SCNpilot_expt_1000_bf_scaffold_530_5
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7338..9017
DNA (1680bp) protein (560aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EKT8_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:EDM33917.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_530_6
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9036..11246)
DNA (2211bp) protein (737aa)
alpha-glucosidase; K01811 alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
Alpha-glucosidase {ECO:0000313|EMBL:AEE51608.1}; EC=3.2.1.20 {ECO:0000313|EMBL:AEE51608.1};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI0003801E6D rbh
SCNpilot_expt_1000_bf_scaffold_530_7
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11479..12381)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035D2AAC rbh
Nucleotide pyrophosphatase {ECO:0000313|EMBL:KIA88944.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
type I phosphodiesterase/nucleotide pyrophosphatase rbh
SCNpilot_expt_1000_bf_scaffold_530_8
unknown

Not on your lists

12541..12900
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_530_9
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(13001..14572)
DNA (1572bp) protein (524aa)
beta-fructosidase, family GH32 (EC:3.2.1.26)
Glycosyl hydrolase family 32 domain protein id=4124041 bin=GWC2_Clostridiales_40_7 species=Haladaptatus paucihalophilus genus=Haladaptatus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
Tax=CG_Arma_01
SCNpilot_expt_1000_bf_scaffold_530_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14677..15186
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9N4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00227.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_530_11
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15289..15810
DNA (522bp) protein (174aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003665F7E
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase {ECO:0000313|EMBL:KIC91826.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_expt_1000_bf_scaffold_530_12
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15879..17063
DNA (1185bp) protein (395aa)
glutaryl-CoA dehydrogenase; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7]
acyl-CoA dehydrogenase n=1 Tax=Segetibacter koreensis RepID=UPI0003656A3F
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KIC89323.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_expt_1000_bf_scaffold_530_13
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17205..17711
DNA (507bp) protein (169aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71]
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0003063165
SCNpilot_expt_1000_bf_scaffold_530_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17704..18135
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJQ3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00800.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_530_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18139..20076)
DNA (1938bp) protein (646aa)
Putative signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJQ2_NIAKG
putative signal transduction histidine kinase
Putative signal transduction histidine kinase {ECO:0000313|EMBL:AEW00799.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_530_16
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20192..22714
DNA (2523bp) protein (841aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000363F0AB
Cell division protein FtsK {ECO:0000313|EMBL:KIC89319.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
cell division protein FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
SCNpilot_expt_1000_bf_scaffold_530_17
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22797..23468
DNA (672bp) protein (224aa)
Outer membrane lipoprotein carrier protein LolA n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIA8_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:KIC89318.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
outer membrane lipoprotein carrier protein LolA
SCNpilot_expt_1000_bf_scaffold_530_18
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23605..24165)
DNA (561bp) protein (187aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-]
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJP9_NIAKG
SCNpilot_expt_1000_bf_scaffold_530_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24198..24764
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJP8_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00795.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_530_20
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25481..26584
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000381D154
DNA processing protein DprA {ECO:0000313|EMBL:AHF16602.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
DNA protecting protein DprA; K04096 DNA processing protein
SCNpilot_expt_1000_bf_scaffold_530_21
unknown

Not on your lists

comp(26599..26751)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_530_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26792..28120
DNA (1329bp) protein (443aa)
inosine-5'-monophosphate dehydrogenase; K00088 IMP dehydrogenase [EC:1.1.1.205]
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 114
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9Y9_NIAKG
SCNpilot_expt_1000_bf_scaffold_530_23
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28246..29295
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037278EB
Fec operon regulator FecR {ECO:0000313|EMBL:KHJ39289.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
anti-FecI sigma factor FecR
SCNpilot_expt_1000_bf_scaffold_530_24
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29313..33128
DNA (3816bp) protein (1272aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003780026
TonB-dependent receptor plug rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:AEI49134.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_expt_1000_bf_scaffold_530_25
RBG_13_Bacteroidetes_46_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33162..34895
DNA (1734bp) protein (578aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036AB14F
hypothetical protein
Tax=RBG_13_Bacteroidetes_46_8_curated
SCNpilot_expt_1000_bf_scaffold_530_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

34984..36477
DNA (1494bp) protein (498aa)
glycerol kinase; K00864 glycerol kinase [EC:2.7.1.30]
Glycerol kinase n=1 Tax=Niabella soli DSM 19437 RepID=H1NTV8_9SPHI
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_1000_bf_scaffold_530_27
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36538..38094
DNA (1557bp) protein (519aa)
Glycerol-3-phosphate dehydrogenase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KPE8_SOLCM rbh
glycerol-3-phosphate dehydrogenase rbh
Glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:AFD05846.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_expt_1000_bf_scaffold_530_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38104..39405)
DNA (1302bp) protein (434aa)
Radical SAM domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFK6_NIAKG rbh
radical SAM protein rbh
Radical SAM domain protein {ECO:0000313|EMBL:AEV98437.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_530_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(39415..40392)
DNA (978bp) protein (326aa)
Signal recognition particle receptor FtsY n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPT6_NIAKG rbh
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor rbh
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_530_30
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(40402..40932)
DNA (531bp) protein (177aa)
GCN5-related N-acetyltransferase n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CHT2_ELIME
GNAT family acetyltransferase {ECO:0000313|EMBL:KFF74652.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
acetyltransferase
Displaying items 1-30 of 42 in total

View Taxonomy