ggKbase home page

SCNpilot_expt_1000_bf_scaffold_664

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_664_1
unknown

Not on your lists

3..119
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_664_2
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

116..1252
DNA (1137bp) protein (379aa)
Putative uncharacterized protein id=2143764 bin=GWE2_Bacteroidetes_32_14 species=Leeuwenhoekiella blandensis genus=Leeuwenhoekiella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good + rbh
hypothetical protein rbh
Tax=GWE2_Bacteroidetes_32_14_curated
SCNpilot_expt_1000_bf_scaffold_664_3
uncultured Acetothermia bacterium, Acetothermia, Bacteria

Not on your lists

1252..1755
DNA (504bp) protein (168aa)
PilT domain-containing protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SL06_9BACT
PilT domain-containing protein {ECO:0000313|EMBL:BAL56842.1}; TaxID=236499 species="Bacteria; Acetothermia; environmental samples.;" source="uncultured Acetothermia bacterium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_664_4
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1872..2783
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036950BD
Restriction endonuclease {ECO:0000313|EMBL:AKD56215.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
mrr; Mrr restriction system protein; K07448 restriction system protein
SCNpilot_expt_1000_bf_scaffold_664_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2875..4794)
DNA (1920bp) protein (640aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368438D
Chloride channel protein {ECO:0000313|EMBL:AHF16327.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Cl-channel voltage-gated family protein
SCNpilot_expt_1000_bf_scaffold_664_6
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4870..5577
DNA (708bp) protein (236aa)
cAMP-binding protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KS76_SOLCM
cAMP-binding protein
cAMP-binding protein {ECO:0000313|EMBL:AFD07864.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_expt_1000_bf_scaffold_664_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5628..6062
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRP1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02188.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_664_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6159..6356)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TML9_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02007.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_664_9
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6905..8602
DNA (1698bp) protein (566aa)
Peptidase M23 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TML8_NIAKG rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC89696.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
peptidase M23 rbh
SCNpilot_expt_1000_bf_scaffold_664_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8606..9076
DNA (471bp) protein (157aa)
peroxiredoxin; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Peroxiredoxin {ECO:0000313|EMBL:AEW02005.1}; EC=1.11.1.15 {ECO:0000313|EMBL:AEW02005.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Peroxiredoxin n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TML7_NIAKG
SCNpilot_expt_1000_bf_scaffold_664_11
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9080..9376
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037DA172
Uncharacterized protein {ECO:0000313|EMBL:GAL83380.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_664_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9447..9764)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THE5_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02791.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_664_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9770..10546)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003829841 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEW02793.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_664_14
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10550..11746)
DNA (1197bp) protein (399aa)
Cystathionine gamma-lyase {ECO:0000313|EMBL:ACU57992.1}; EC=4.4.1.1 {ECO:0000313|EMBL:ACU57992.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Cystathionine gamma-lyase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG09_CHIPD
cystathionine gamma-synthase
SCNpilot_expt_1000_bf_scaffold_664_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11996..12439
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THE9_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02795.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_664_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12489..14363)
DNA (1875bp) protein (625aa)
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:AEW02796.1}; EC=6.3.5.4 {ECO:0000313|EMBL:AEW02796.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003619E4B
SCNpilot_expt_1000_bf_scaffold_664_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14373..16097)
DNA (1725bp) protein (575aa)
NH(3)-dependent NAD(+) synthetase; K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
NH(3)-dependent NAD(+) synthetase {ECO:0000313|EMBL:AEW01912.1}; EC=6.3.1.5 {ECO:0000313|EMBL:AEW01912.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
NH(3)-dependent NAD(+) synthetase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL71_NIAKG
SCNpilot_expt_1000_bf_scaffold_664_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16188..16406
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGC8_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02767.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_664_19
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16577..17443)
DNA (867bp) protein (289aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EQC1_EMTOG
Xylose isomerase domain-containing protein TIM barrel
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AFK01874.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
SCNpilot_expt_1000_bf_scaffold_664_20
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17727..18269
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000369E792
Uncharacterized protein {ECO:0000313|EMBL:AHM63209.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
SCNpilot_expt_1000_bf_scaffold_664_21
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18305..19546)
DNA (1242bp) protein (414aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037816B7 rbh
MFS transporter {ECO:0000313|EMBL:AKD58547.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
major facilitator superfamily protein rbh
SCNpilot_expt_1000_bf_scaffold_664_22
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19683..20453)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370FCE2 rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CCH54144.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
3-oxoacyl-ACP reductase rbh
SCNpilot_expt_1000_bf_scaffold_664_23
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20556..21707)
DNA (1152bp) protein (384aa)
oxidoreductase n=1 Tax=Segetibacter koreensis RepID=UPI000370FDF1 rbh
oxidoreductase domain-containing protein rbh
Tax=GWA2_Bacteroidetes_40_15_curated
SCNpilot_expt_1000_bf_scaffold_664_24
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21803..22636)
DNA (834bp) protein (278aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L100_HALH1
xylose isomerase domain-containing protein
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AEE51587.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_expt_1000_bf_scaffold_664_25
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22672..24048)
DNA (1377bp) protein (459aa)
glycosyl hydrolase n=1 Tax=Segetibacter koreensis RepID=UPI0003795EDA rbh
glycosyl hydrolase family 88 rbh
Glycosyl hydrolase family 88 {ECO:0000313|EMBL:AFK02300.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
SCNpilot_expt_1000_bf_scaffold_664_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24225..24635)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000364D0C4
KilA-N, DNA-binding domain-containing protein
KilA-N, DNA-binding domain protein {ECO:0000313|EMBL:AEV97472.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_664_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24722..25765
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7M4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02279.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_664_28
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

25847..26191
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3ILZ5_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB62740.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_664_29
Crocosphaera watsonii, Crocosphaera, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

26363..26761
DNA (399bp) protein (133aa)
Uncharacterized protein n=6 Tax=Crocosphaera watsonii RepID=Q4C6K7_CROWT
Uncharacterized protein {ECO:0000313|EMBL:CCQ57126.1}; TaxID=423472 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Crocosphaera.;" source="Crocosphaera watsonii WH 0005.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_664_30
unknown

Not on your lists

comp(26718..27014)
DNA (297bp) protein (99aa)

This feature has no annotations

Displaying items 1-30 of 74 in total

View Taxonomy