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SCNpilot_expt_1000_bf_scaffold_1042

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1042_1
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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743..1747
DNA (1005bp) protein (335aa)
Uncharacterized protein n=2 Tax=Elizabethkingia anophelis RepID=L8K4K6_9FLAO
Multidrug transporter {ECO:0000313|EMBL:KFC33539.1}; TaxID=238 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica (Chryseobacterium meningosepticum).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1042_2
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1973..2350)
DNA (378bp) protein (126aa)
Sulfate transporter/antisigma-factor antagonist STAS n=1 Tax=Niabella soli DSM 19437 RepID=H1NRZ0_9SPHI
Anti-sigma-factor antagonist {ECO:0000313|EMBL:KIC93005.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
sulfate transporter/antisigma-factor antagonist STAS
SCNpilot_expt_1000_bf_scaffold_1042_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2592..5123
DNA (2532bp) protein (844aa)
ATPase AAA-2 domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNQ5_NIAKG
Clp protease ClpC {ECO:0000313|EMBL:KIC93004.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ATPase AAA-2 domain-containing protein; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC
SCNpilot_expt_1000_bf_scaffold_1042_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5303..5977
DNA (675bp) protein (225aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238, ECO:0000256|SAAS:SAAS00098295};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14]
cytidylate kinase n=1 Tax=Niabella aurantiaca RepID=UPI0003816C31
SCNpilot_expt_1000_bf_scaffold_1042_5
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6013..6357
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BIY0_ZUNPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADF53613.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
SCNpilot_expt_1000_bf_scaffold_1042_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6642..7523
DNA (882bp) protein (294aa)
ATP synthase F1 subcomplex subunit gamma; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14]
ATP synthase gamma chain n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDR0_NIAKG
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_1042_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7601..8383
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036AFFB0
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_1000_bf_scaffold_1042_8
unknown

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8600..8905
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1042_9
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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8983..10662
DNA (1680bp) protein (560aa)
Sulfate transporter n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SMS9_9FLAO
Sulfate transporter {ECO:0000313|EMBL:ESU25695.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
sulfate transporter
SCNpilot_expt_1000_bf_scaffold_1042_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10836..11249
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000365DF57
Hydroxymyristoyl-ACP dehydratase {ECO:0000313|EMBL:AHF15908.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1042_11
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11259..11900
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAY3_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:GAO42091.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1042_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12015..12440
DNA (426bp) protein (142aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Thioesterase superfamily protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAY4_CHIPD
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:KIC95146.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCNpilot_expt_1000_bf_scaffold_1042_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12456..13589
DNA (1134bp) protein (378aa)
beta-ketoacyl synthase; K00647 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
Beta-ketoacyl-acyl-carrier-protein synthase I n=1 Tax=Niabella soli DSM 19437 RepID=H1NQJ1_9SPHI
Beta-ketoacyl synthase {ECO:0000313|EMBL:AHF15906.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_1042_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13610..14680
DNA (1071bp) protein (357aa)
O-methyltransferase family 2 n=1 Tax=Niabella soli DSM 19437 RepID=H1NQD9_9SPHI
O-methyltransferase {ECO:0000313|EMBL:AHF15905.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
type 12 methyltransferase rbh
SCNpilot_expt_1000_bf_scaffold_1042_15
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14814..16070
DNA (1257bp) protein (419aa)
Tryptophan halogenase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAY7_CHIPD
tryptophan halogenase
Tryptophan halogenase {ECO:0000313|EMBL:ACU59359.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_1042_16
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16290..16856
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y1H7_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ30851.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1042_17
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16837..17100
DNA (264bp) protein (88aa)
Phosphopantetheine-binding protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQD5_9SPHI
Acyl carrier protein {ECO:0000313|EMBL:AHF15902.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
phosphopantetheine-binding protein; K02078 acyl carrier protein
SCNpilot_expt_1000_bf_scaffold_1042_18
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17231..18436
DNA (1206bp) protein (402aa)
beta-ACP synthase n=1 Tax=Niabella aurantiaca RepID=UPI00037E58B5
Beta-ketoacyl synthase {ECO:0000313|EMBL:EHQ30850.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
beta-ketoacyl synthase rbh
SCNpilot_expt_1000_bf_scaffold_1042_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18436..19473
DNA (1038bp) protein (346aa)
Beta-ketoacyl synthase n=1 Tax=Niabella soli DSM 19437 RepID=H1NQD3_9SPHI
3-oxoacyl-ACP synthase {ECO:0000313|EMBL:AHF15900.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
beta-ketoacyl synthase
SCNpilot_expt_1000_bf_scaffold_1042_20
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19467..20240
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000381D782
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ACU59364.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_1042_21
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20233..20868
DNA (636bp) protein (212aa)
Outer membrane lipoprotein carrier protein LolA n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAZ3_CHIPD
Cell envelope biogenesis protein LolA {ECO:0000313|EMBL:KIC95238.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
outer membrane lipoprotein carrier protein LolA
SCNpilot_expt_1000_bf_scaffold_1042_22
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20846..21469
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036A4C27
Uncharacterized protein {ECO:0000313|EMBL:AHF17740.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1042_23
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21459..21821
DNA (363bp) protein (121aa)
hypothetical protein; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y1H4_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ30848.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
Displaying 23 items

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