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SCNpilot_expt_1000_bf_scaffold_1134

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1134_1
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(252..1622)
DNA (1371bp) protein (457aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
PpiC-type peptidyl-prolyl cis-trans isomerase; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003788883
SCNpilot_expt_1000_bf_scaffold_1134_2
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1699..4614)
DNA (2916bp) protein (972aa)
Translation initiation factor IF-2 n=1 Tax=Niabella soli DSM 19437 RepID=H1NR38_9SPHI
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
translation initiation factor 2 (bIF-2); K02519 translation initiation factor IF-2
SCNpilot_expt_1000_bf_scaffold_1134_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4722..5969)
DNA (1248bp) protein (416aa)
NusA antitermination factor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8W7_NIAKG
NusA antitermination factor; K02600 N utilization substance protein A
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_1134_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6032..6562)
DNA (531bp) protein (177aa)
Ribosome maturation factor RimP n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8W8_NIAKG
Ribosome maturation factor rimP; K09748 ribosome maturation factor RimP
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_1134_5
GWC2_Planctomycetes_45_44_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(6670..7644)
DNA (975bp) protein (325aa)
WCFX; UDP-glucuronic acid epimerase; K08679 UDP-glucuronate 4-epimerase [EC:5.1.3.6] rbh
NAD dependent epimerase/dehydratase family protein n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XMB6_9HELI rbh
Tax=GWC2_Planctomycetes_45_44_curated
SCNpilot_expt_1000_bf_scaffold_1134_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7858..8925)
DNA (1068bp) protein (356aa)
peptide chain release factor 1 n=1 Tax=Niabella aurantiaca RepID=UPI0003642013
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
peptide chain release factor 1 (bRF-1); K02835 peptide chain release factor 1
SCNpilot_expt_1000_bf_scaffold_1134_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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9121..10257
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035C9823
Uncharacterized protein {ECO:0000313|EMBL:KIC89676.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
amidohydrolase
SCNpilot_expt_1000_bf_scaffold_1134_8
unknown

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10417..13326
DNA (2910bp) protein (970aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1134_9
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(13329..16175)
DNA (2847bp) protein (949aa)
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7]
DNA polymerase I n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCH4_NIAKG
DNA polymerase I {ECO:0000313|EMBL:KIC91017.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_expt_1000_bf_scaffold_1134_10
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

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comp(16680..19445)
DNA (2766bp) protein (922aa)
alpha-L-rhamnosidase; K05989 alpha-L-rhamnosidase [EC:3.2.1.40]
Alpha-L-rhamnosidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNI4_NIAKG
Tax=RBG_16_Planctomycetes_64_12_curated
Displaying 10 items

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