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SCNpilot_expt_1000_bf_scaffold_1438

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1438_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3..455
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000376332F
Uncharacterized protein {ECO:0000313|EMBL:AHF14122.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_1438_2
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1826..2677
DNA (852bp) protein (284aa)
UspA n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GYD2_9SPHI
UspA {ECO:0000313|EMBL:EOR96643.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
UspA domain-containing protein
SCNpilot_expt_1000_bf_scaffold_1438_3
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2887..3471)
DNA (585bp) protein (195aa)
cyclic nucleotide-binding protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00037FB2D0
putative Crp/Fnr family transcriptional regulator
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:AEI51317.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_expt_1000_bf_scaffold_1438_4
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3583..5904
DNA (2322bp) protein (774aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000381A16A
Uncharacterized protein {ECO:0000313|EMBL:ETZ23740.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1438_5
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5909..7366
DNA (1458bp) protein (486aa)
sulfatase n=1 Tax=Segetibacter koreensis RepID=UPI000379B81E rbh
Sulfatase {ECO:0000313|EMBL:ETZ23741.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1438_6
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7465..8490
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F4BEB
Uncharacterized protein {ECO:0000313|EMBL:ETZ23742.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1438_7
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8490..10646
DNA (2157bp) protein (719aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037EBBE7
Uncharacterized protein {ECO:0000313|EMBL:ETZ23743.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
cytochrome C
SCNpilot_expt_1000_bf_scaffold_1438_8
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11240..12484
DNA (1245bp) protein (415aa)
Sodium/hydrogen exchanger n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PE22_CHIPD
Sodium:proton exchanger {ECO:0000313|EMBL:KFF12079.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
sodium/hydrogen exchanger
SCNpilot_expt_1000_bf_scaffold_1438_9
unknown

Not on your lists

comp(12571..13146)
DNA (576bp) protein (192aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1438_10
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13463..14248
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002EE4753
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ28404.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1438_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14267..14626
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQI9_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03236.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_1438_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14637..15668
DNA (1032bp) protein (344aa)
Putative signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQI8_NIAKG
putative signal transduction histidine kinase
Putative signal transduction histidine kinase {ECO:0000313|EMBL:AEW03235.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_1438_13
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15665..16408
DNA (744bp) protein (248aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y6Z4_9SPHI
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:EHQ28401.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
LytTR family two component transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1438_14
unknown

Not on your lists

16496..17056
DNA (561bp) protein (187aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1438_15
Alcanivorax sp. 19-m-6, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17177..17677
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Alcanivorax sp. P2S70 RepID=U7FH60_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGD66304.1}; TaxID=1177154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. 19-m-6.;"
SCNpilot_expt_1000_bf_scaffold_1438_16
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17696..19036)
DNA (1341bp) protein (447aa)
Xaa-Pro aminopeptidase n=1 Tax=Spirosoma spitsbergense RepID=UPI000373A930 rbh
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:KIC90931.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Xaa-Pro aminopeptidase rbh
SCNpilot_expt_1000_bf_scaffold_1438_17
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19436..20320
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036A031A
Uncharacterized protein {ECO:0000313|EMBL:KIA95845.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1438_18
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20350..21336
DNA (987bp) protein (329aa)
TatD-related deoxyribonuclease n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PV71_CHIPD
TatD-related deoxyribonuclease; K07051
TatD-related deoxyribonuclease {ECO:0000313|EMBL:ACU64664.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_1438_19
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21355..22245
DNA (891bp) protein (297aa)
UbiA prenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036F0A64
UbiA prenyltransferase {ECO:0000313|EMBL:ACU02653.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_1000_bf_scaffold_1438_20
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22386..23543
DNA (1158bp) protein (386aa)
3-dehydroquinate synthase {ECO:0000313|EMBL:CCH55297.1}; EC=4.2.3.4 {ECO:0000313|EMBL:CCH55297.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4]
3-dehydroquinate synthase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037C7D6F
SCNpilot_expt_1000_bf_scaffold_1438_21
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23543..24754
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PV68_CHIPD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU64661.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_1438_22
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24759..26117
DNA (1359bp) protein (453aa)
phosphodiesterase n=1 Tax=Segetibacter koreensis RepID=UPI000382169E
type I phosphodiesterase/nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:ADZ77028.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
Displaying 22 items

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