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SCNpilot_expt_1000_bf_scaffold_1649

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1649_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(160..2601)
DNA (2442bp) protein (814aa)
TonB-dependent receptor n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XSY2_PEDHD rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC95799.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_expt_1000_bf_scaffold_1649_2
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2613..4010)
DNA (1398bp) protein (466aa)
Vitamin K-dependent gamma-carboxylase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XSY3_PEDHD rbh
Deoxyribonuclease HsdR {ECO:0000313|EMBL:KIC95798.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Vitamin K-dependent gamma-carboxylase rbh
SCNpilot_expt_1000_bf_scaffold_1649_3
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4000..5127)
DNA (1128bp) protein (376aa)
Periplasmic lipoprotein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XSY4_PEDHD
Uncharacterized protein {ECO:0000313|EMBL:ETZ21167.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
lipoprotein; K07338 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1649_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5231..6343)
DNA (1113bp) protein (371aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XSY5_PEDHD
Uncharacterized protein {ECO:0000313|EMBL:KIC95796.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1649_5
Prevotella sp. CAG:1124, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6639..7307
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:1124 RepID=R5KU22_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCY64412.1}; TaxID=1262920 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1124.;"
winged helix family two component transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1649_6
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7431..9842
DNA (2412bp) protein (804aa)
TonB-dependent receptor n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2S3_9FLAO rbh
TonB-dependent receptor {ECO:0000313|EMBL:KFF22377.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
TonB-dependent receptor plug rbh
SCNpilot_expt_1000_bf_scaffold_1649_7
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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9958..10737
DNA (780bp) protein (260aa)
PAP2 family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2S2_9FLAO rbh
PA-phosphatase {ECO:0000313|EMBL:AIM37536.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
phosphoesterase PA-phosphatase-like protein
SCNpilot_expt_1000_bf_scaffold_1649_8
Myroides odoratus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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10754..11170
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Myroides RepID=K1HSS1_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ41152.1}; Flags: Precursor;; TaxID=929704 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratus DSM 2801.;"
hypothetical protein; K08978 putative membrane protein
SCNpilot_expt_1000_bf_scaffold_1649_9
Gramella forsetii, Gramella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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11403..12308
DNA (906bp) protein (302aa)
Protein containing AraC type HTH domain n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M6C0_GRAFK
HTH domain-containing protein
Protein containing AraC type HTH domain {ECO:0000313|EMBL:CAL68165.1}; TaxID=411154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gramella.;" source="Gramella forsetii (strain KT0803).;"
SCNpilot_expt_1000_bf_scaffold_1649_10
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(12651..13355)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VRM6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KGE13034.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1649_11
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13426..14676)
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029B55D6 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFF04309.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1649_12
unknown

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15171..15437
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1649_13
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(15593..16726)
DNA (1134bp) protein (378aa)
TonB-dependent receptor, plug n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FEP2_FLAJ1
TonB-dependent receptor {ECO:0000313|EMBL:KEQ28322.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
TonB-dependent receptor, plug
SCNpilot_expt_1000_bf_scaffold_1649_14
unknown

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comp(16795..17082)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1649_15
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17116..17583
DNA (468bp) protein (156aa)
DNA-binding protein n=1 Tax=Pedobacter agri RepID=UPI00029A37C7
DNA-binding protein {ECO:0000313|EMBL:KFF04311.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
helix-turn-helix domain-containing protein
Displaying 15 items

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