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SCNpilot_expt_1000_bf_scaffold_363

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_363_1
unknown

Not on your lists

386..748
DNA (363bp) protein (121aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_363_2
Aspergillus ochraceoroseus, Aspergillus, Eurotiales, Eurotiomycetidae, Ascomycota, Fungi

Not on your lists

1019..1780
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Ceriporiopsis subvermispora (strain B) RepID=M2PJR0_CERS8
UbiE/COQ5 methyltransferase {ECO:0000313|EMBL:KKK18308.1}; TaxID=138278 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus.;" source="Aspergillus ochraceoroseus.;"
methyltransferase, S-adenosyl-L-methionine (SAM)-MTase protein
SCNpilot_expt_1000_bf_scaffold_363_3
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1891..2457
DNA (567bp) protein (189aa)
nitrile hydratase subunit alpha; K01721 nitrile hydratase [EC:4.2.1.84]
Nitrile hydratase, alpha subunit n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UB04_SINMW
Nitrile hydratase {ECO:0000313|EMBL:KJS15735.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
SCNpilot_expt_1000_bf_scaffold_363_4
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2454..3113
DNA (660bp) protein (220aa)
Nitrile hydratase, beta subunit n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VV52_9RHIZ
Nitrile hydratase, beta subunit {ECO:0000313|EMBL:EJN04040.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
nitrile hydratase, beta subunit
SCNpilot_expt_1000_bf_scaffold_363_5
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3100..3444
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031B568C
Uncharacterized protein {ECO:0000313|EMBL:CDX35192.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_363_6
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3521..4135
DNA (615bp) protein (205aa)
Uncharacterized protein {ECO:0000313|EMBL:EYC51081.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
SCNpilot_expt_1000_bf_scaffold_363_7
unknown

Not on your lists

comp(4144..4482)
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_363_8
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4723..5304
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X5R5_RHIFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL51221.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_expt_1000_bf_scaffold_363_9
unknown

Not on your lists

5319..5474
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_363_10
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5578..6657)
DNA (1080bp) protein (360aa)
Probable DNA repair protein Rvan_0632 n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3HZV8_RHOVT
Ku protein; K10979 DNA end-binding protein Ku
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
SCNpilot_expt_1000_bf_scaffold_363_11
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6944..7579
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HFX0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EPE96965.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_363_12
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7696..8700
DNA (1005bp) protein (335aa)
Transcriptional regulator, LacI family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YGF7_MESOW
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AEH90342.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_363_13
bacterium UASB14, Bacteria

Not on your lists

8862..10613
DNA (1752bp) protein (584aa)
Putative ABC transporter substrate binding protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I7J1_CALAS
Extracellular solute-binding protein, family 5 {ECO:0000313|EMBL:GAK54075.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
putative ABC transporter substrate binding protein
SCNpilot_expt_1000_bf_scaffold_363_14
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

10675..11667
DNA (993bp) protein (331aa)
Putative ABC transporter permease protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I7J2_CALAS rbh
ABC transporter permease; K02033 peptide/nickel transport system permease protein rbh
Putative ABC transporter permease protein {ECO:0000313|EMBL:BAM01230.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
SCNpilot_expt_1000_bf_scaffold_363_15
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

11668..12534
DNA (867bp) protein (289aa)
Maltose ABC transporter, permease n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2Q8_THERP rbh
maltose ABC transporter permease; K02034 peptide/nickel transport system permease protein rbh
Maltose ABC transporter, permease {ECO:0000313|EMBL:ACM05736.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
SCNpilot_expt_1000_bf_scaffold_363_16
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

12531..13514
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037BFEE9
putative oligopeptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein
Tax=RBG_16_Chloroflexi_54_18_curated
SCNpilot_expt_1000_bf_scaffold_363_17
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13501..14490
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036006C1
ABC transporter {ECO:0000313|EMBL:KGM35067.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
oligopeptide transport ATP-binding protein OppF; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_363_18
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

14509..15597
DNA (1089bp) protein (363aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NMR8_ROSCS
Uncharacterized protein {ECO:0000313|EMBL:AIE83734.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_363_19
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15886..16461)
DNA (576bp) protein (192aa)
malL; oligosaccharide alpha-1,6-glucosidase (EC:3.2.1.93); K01182 oligo-1,6-glucosidase [EC:3.2.1.10]
Oligosaccharide alpha-1,6-glucosidase protein n=1 Tax=Sagittula stellata E-37 RepID=A3K7L2_9RHOB
Oligosaccharide alpha-1,6-glucosidase protein {ECO:0000313|EMBL:EBA06971.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellata E-37.;"
SCNpilot_expt_1000_bf_scaffold_363_20
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16686..17465
DNA (780bp) protein (260aa)
integrase n=1 Tax=Martelella mediterranea RepID=UPI000361D94E
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ABS69227.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_expt_1000_bf_scaffold_363_21
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17515..18369)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Catenovulum agarivorans RepID=UPI000362DBE3
Uncharacterized protein {ECO:0000313|EMBL:KKB82575.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
LacI family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_363_22
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18710..20023
DNA (1314bp) protein (438aa)
sugar-binding protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B73A02
Multiple sugar-binding protein {ECO:0000313|EMBL:KJL21110.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
putative sugar ABC transporter, substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_363_23
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20100..20984
DNA (885bp) protein (295aa)
sugar ABC transporter permease n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B532EF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE74344.1}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis NCPPB 2581.;"
SCNpilot_expt_1000_bf_scaffold_363_24
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20981..21868
DNA (888bp) protein (296aa)
sugar ABC transporter permease n=1 Tax=Arthrobacter sp. 161MFSha2.1 RepID=UPI000371BB34
SPG23_c9, whole genome shotgun sequence {ECO:0000313|EMBL:KIS28656.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
yurM3; ABC transporter permease protein YurM
SCNpilot_expt_1000_bf_scaffold_363_25
Exophiala mesophila, Exophiala, Chaetothyriales, Chaetothyriomycetidae, Ascomycota, Fungi

Not on your lists

21892..23355
DNA (1464bp) protein (488aa)
Glycosyl hydrolase family 32 n=1 Tax=Treponema lecithinolyticum ATCC 700332 RepID=U2K3H6_TRELE rbh
Strain CBS 40295 unplaced genomic scaffold supercont1.5, whole genome shotgun sequence {ECO:0000313|EMBL:KIV89829.1}; TaxID=212818 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae; Exophiala.;" source="Exophiala mesophila.;"
Beta-fructosidases (levanase/invertase) rbh
SCNpilot_expt_1000_bf_scaffold_363_26
Tolumonas auensis, Tolumonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23352..24722
DNA (1371bp) protein (457aa)
Glycosyl hydrolase family 32 domain-containing protein; K01212 levanase [EC:3.2.1.65]
Glycosyl hydrolase family 32 domain protein n=1 Tax=Tolumonas auensis (strain DSM 9187 / TA4) RepID=C4LCS8_TOLAT
Glycosyl hydrolase family 32 domain protein {ECO:0000313|EMBL:ACQ93741.1}; TaxID=595494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Tolumonas.;" source="Tolumonas auensis (strain DSM 9187 / TA4).;"
SCNpilot_expt_1000_bf_scaffold_363_27
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24693..25742)
DNA (1050bp) protein (350aa)
LacI family transcriptional regulator n=1 Tax=Rhizobium giardinii RepID=UPI00037CAFA0 rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:KEC69744.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;"
LacI family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_363_28
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25914..27155
DNA (1242bp) protein (414aa)
Probable sugar ABC transporter, substrate-binding protein n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2K100_RHIEC
sugar ABC transporter, substrate-binding protein
Probable sugar ABC transporter, substrate-binding protein {ECO:0000313|EMBL:ABC93794.1}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
SCNpilot_expt_1000_bf_scaffold_363_29
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27231..28109
DNA (879bp) protein (293aa)
sugar ABC transporter permease n=1 Tax=Rhizobium phaseoli RepID=UPI00037EAEBA rbh
Sugar ABC transporter permease protein {ECO:0000313|EMBL:AIC31762.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
sugar ABC transporter permease protein rbh
SCNpilot_expt_1000_bf_scaffold_363_30
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28102..28938
DNA (837bp) protein (279aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhizobium sp. Pop5 RepID=K0W792_9RHIZ rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EJZ22783.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein rbh
Displaying items 1-30 of 67 in total

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