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SCNpilot_expt_1000_bf_scaffold_2140

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2140_1
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(200..535)
DNA (336bp) protein (112aa)
UPI0003CFA83A related cluster n=1 Tax=unknown RepID=UPI0003CFA83A
Uncharacterized protein {ECO:0000313|EMBL:ESZ13031.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2140_2
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(532..1200)
DNA (669bp) protein (223aa)
UPI0003D0012E related cluster n=1 Tax=unknown RepID=UPI0003D0012E
Uncharacterized protein {ECO:0000313|EMBL:ESZ13032.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2140_3
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1187..1408)
DNA (222bp) protein (74aa)
UPI0003D0012E related cluster n=1 Tax=unknown RepID=UPI0003D0012E
Uncharacterized protein {ECO:0000313|EMBL:ESZ13032.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2140_4
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1405..1881)
DNA (477bp) protein (159aa)
UPI0003D03294 related cluster n=1 Tax=unknown RepID=UPI0003D03294
Uncharacterized protein {ECO:0000313|EMBL:ESZ13033.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2140_5
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1966..3669)
DNA (1704bp) protein (568aa)
ParB family protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MT2_MESSB
Plasmid partitioning protein {ECO:0000313|EMBL:EXL02100.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
plasmid partitioning protein
SCNpilot_expt_1000_bf_scaffold_2140_6
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3790..4839
DNA (1050bp) protein (350aa)
Putative transposase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YMQ7_MOBAS rbh
Putative transposase {ECO:0000313|EMBL:EAS51324.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
transposase IS116/IS110/IS902 family protein rbh
SCNpilot_expt_1000_bf_scaffold_2140_7
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4836..5339)
DNA (504bp) protein (168aa)
transposase IS3 n=1 Tax=Xanthobacteraceae RepID=UPI00035C5D71
Insertion element ISR1 uncharacterized 10 kDa protein A3
Insertion element ISR1 uncharacterized 10 kDa protein A3 {ECO:0000313|EMBL:CDI12062.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. IRBG74.;"
SCNpilot_expt_1000_bf_scaffold_2140_8
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5830..6759)
DNA (930bp) protein (310aa)
OmpA family protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LTF2_RUEPO
OmpA family protein
OmpA family protein {ECO:0000313|EMBL:AAV94749.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3); (Silicibacter pomeroyi).;"
SCNpilot_expt_1000_bf_scaffold_2140_9
unknown

Not on your lists

comp(6704..7063)
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2140_10
unknown

Not on your lists

7262..8356
DNA (1095bp) protein (365aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2140_11
unknown

Not on your lists

comp(8349..8492)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2140_12
unknown

Not on your lists

comp(8734..9024)
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2140_13
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9763..10794
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031AB6F9 rbh
hypothetical protein rbh
Blr8069 protein {ECO:0000313|EMBL:BAC53334.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_expt_1000_bf_scaffold_2140_14
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11107..11193)
DNA (87bp) protein (29aa)
ArgG {ECO:0000313|EMBL:CDX12138.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Displaying 14 items

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