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SCNpilot_expt_1000_bf_scaffold_5381

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5381_1
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1183
DNA (1182bp) protein (394aa)
MFS transporter n=2 Tax=Oligotropha carboxidovorans RepID=F8BR07_OLICM
major facilitator superfamily protein
MFS transporter {ECO:0000313|EMBL:AEI08251.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_1000_bf_scaffold_5381_2
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1456..1671
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5ASF4_METEA
Uncharacterized protein {ECO:0000313|EMBL:AII54458.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5381_3
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1668..2357
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5ASF5_METEA
hypothetical protein; K06196 cytochrome c-type biogenesis protein
Uncharacterized protein {ECO:0000313|EMBL:ACS40396.1}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
SCNpilot_expt_1000_bf_scaffold_5381_4
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2369..2602
DNA (234bp) protein (78aa)
Copper/silver-translocating P-type ATPase n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z802_BELBD
copper/silver-translocating P-type ATPase
Copper/silver-translocating P-type ATPase {ECO:0000313|EMBL:AFL85370.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
SCNpilot_expt_1000_bf_scaffold_5381_5
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3140..4180
DNA (1041bp) protein (347aa)
Transcriptional regulator, LysR family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SV74_CAUSK rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABZ72964.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_expt_1000_bf_scaffold_5381_6
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4202..4438)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00036CEC7F
Uncharacterized protein {ECO:0000313|EMBL:KHJ55156.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5381_7
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4438..5661)
DNA (1224bp) protein (408aa)
Conjugal transfer protein TrbI n=1 Tax=Sphingomonas sp. LH128 RepID=J8VWE4_9SPHN rbh
Conjugal transfer protein TrbI {ECO:0000313|EMBL:EJU15035.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
trbI; conjugal transfer protein TrbI; K03195 type IV secretion system protein VirB10 rbh
SCNpilot_expt_1000_bf_scaffold_5381_8
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5658..5846)
DNA (189bp) protein (63aa)
Conjugal transfer protein TrbG n=1 Tax=Sphingomonas sp. LH128 RepID=J8SQH3_9SPHN
Conjugal transfer protein TrbG {ECO:0000313|EMBL:EJU15034.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
P-type conjugative transfer protein TrbG; K03204 type IV secretion system protein VirB9
Displaying 8 items

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