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SCNpilot_expt_1000_bf_scaffold_101

Search features with annotation key words

Displaying items 1-30 of 250 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_101_1
unknown

Not on your lists

2..151
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_101_2
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

340..750
DNA (411bp) protein (137aa)
Peroxiredoxin, OsmC subfamily n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KUE0_SOLCM
OsmC subfamily peroxiredoxin
Peroxiredoxin, OsmC subfamily {ECO:0000313|EMBL:AFD07305.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_expt_1000_bf_scaffold_101_3
unknown

Not on your lists

comp(843..1118)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_101_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1237..1896)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL90_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01931.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_101_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1981..3825)
DNA (1845bp) protein (615aa)
2-oxoacid:acceptor oxidoreductase subunit alpha; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3]
2-oxoacid:acceptor oxidoreductase, alpha subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIL5_NIAKG
2-oxoglutarate ferredoxin oxidoreductase subunit alpha {ECO:0000313|EMBL:KIC94740.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCNpilot_expt_1000_bf_scaffold_101_6
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3932..4687
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNU9_NIAKG
Membrane protein {ECO:0000313|EMBL:KIC89344.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_101_7
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

comp(4815..5189)
DNA (375bp) protein (125aa)
GTP-binding signal recognition particle n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A3Q8_MELRP
GTP-binding signal recognition particle
Tax=BJP_IG2102_Bacteroidetes_40_9
SCNpilot_expt_1000_bf_scaffold_101_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5317..6042)
DNA (726bp) protein (242aa)
6-phosphogluconolactonase; K01057 6-phosphogluconolactonase [EC:3.1.1.31] rbh
6-phosphogluconolactonase {ECO:0000313|EMBL:AEW02727.1}; EC=3.1.1.31 {ECO:0000313|EMBL:AEW02727.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
6-phosphogluconolactonase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG88_NIAKG rbh
SCNpilot_expt_1000_bf_scaffold_101_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6150..7664)
DNA (1515bp) protein (505aa)
glucose-6-phosphate 1-dehydrogenase; K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] rbh
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG89_NIAKG rbh
SCNpilot_expt_1000_bf_scaffold_101_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7692..9104)
DNA (1413bp) protein (471aa)
6-phosphogluconate dehydrogenase; K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44]
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG90_NIAKG
SCNpilot_expt_1000_bf_scaffold_101_11
unknown

Not on your lists

comp(9144..9344)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_101_12
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9556..10128
DNA (573bp) protein (191aa)
hexapeptide transferase n=1 Tax=Niabella aurantiaca RepID=UPI000362CB88
Transferase hexapeptide repeat containing protein {ECO:0000313|EMBL:AHM61773.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
transferase hexapeptide repeat containing protein
SCNpilot_expt_1000_bf_scaffold_101_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10125..11147
DNA (1023bp) protein (341aa)
Oxidoreductase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK34_NIAKG rbh
oxidoreductase domain-containing protein rbh
Oxidoreductase domain protein {ECO:0000313|EMBL:AEW02972.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_101_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11151..12209
DNA (1059bp) protein (353aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14); K13019 UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:AIY78799.1}; EC=5.1.3.14 {ECO:0000313|EMBL:AIY78799.1};; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI000369B0E8 rbh
SCNpilot_expt_1000_bf_scaffold_101_15
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12550..13086
DNA (537bp) protein (179aa)
NusG antitermination factor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK30_NIAKG
Antitermination protein NusG {ECO:0000313|EMBL:KIC94689.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
NusG antitermination factor
SCNpilot_expt_1000_bf_scaffold_101_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13117..14070
DNA (954bp) protein (318aa)
Soluble ligand binding domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK31_NIAKG
Soluble ligand binding domain-containing protein; K01991 polysaccharide export outer membrane protein
Soluble ligand binding domain protein {ECO:0000313|EMBL:AEW02969.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_101_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14121..16514
DNA (2394bp) protein (798aa)
Capsular exopolysaccharide family {ECO:0000313|EMBL:AEW02970.1}; EC=2.7.10.2 {ECO:0000313|EMBL:AEW02970.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Capsular exopolysaccharide family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK32_NIAKG
capsular exopolysaccharide family protein
SCNpilot_expt_1000_bf_scaffold_101_18
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16562..17842
DNA (1281bp) protein (427aa)
O-antigen translocase n=1 Tax=Arcobacter butzleri (strain RM4018) RepID=A8ESM3_ARCB4
O-antigen translocase
Tax=RBG_16_Deltaproteobacteria_64_85_curated
SCNpilot_expt_1000_bf_scaffold_101_19
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17817..18482
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CCT4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ41427.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_101_20

Not on your lists

18483..19766
DNA (1284bp) protein (428aa)
glycosyl transferase, group 1 id=126178 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
Glycosyl transferase, group 1 {ECO:0000313|EMBL:EKD29076.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
group 1 glycosyl transferase
SCNpilot_expt_1000_bf_scaffold_101_21
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

19774..20391
DNA (618bp) protein (206aa)
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-); K02501 glutamine amidotransferase [EC:2.4.2.-]
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Arcobacter butzleri JV22 RepID=E6L2W7_9PROT
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
SCNpilot_expt_1000_bf_scaffold_101_22
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20391..21158
DNA (768bp) protein (256aa)
Imidazole glycerol phosphate synthase {ECO:0000313|EMBL:EZH72294.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
Imidazole glycerol phosphate synthase, cyclase subunit id=4885414 bin=GWC2_Planctomycete_KSU_39_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
hisF; imidazole glycerol phosphate synthase subunit HisF
SCNpilot_expt_1000_bf_scaffold_101_23
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21285..22502
DNA (1218bp) protein (406aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS07399.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
ExsB family protein id=4885446 bin=GWC2_Planctomycete_KSU_39_26 species=unknown genus=Magnetococcus taxon_order=Magnetococcales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
ExsB family protein
SCNpilot_expt_1000_bf_scaffold_101_24
Agarivorans albus, Agarivorans, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22507..23736
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Sulfurovum sp. SCGC AAA036-F05 RepID=UPI000376CE40
Glycosyltransferase {ECO:0000313|EMBL:GAD04093.1}; TaxID=1331007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Agarivorans.;" source="Agarivorans albus MKT 106.;"
group 1 family glycosyl transferase
SCNpilot_expt_1000_bf_scaffold_101_25
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23827..25029
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI0002F3E46A
Uncharacterized protein {ECO:0000313|EMBL:KEO54702.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica DSM 10166.;"
group 1 glycosyl transferase
SCNpilot_expt_1000_bf_scaffold_101_26
R_RIF_OD1_09_50_13, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

25210..26088
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Paenibacillus polymyxa CR1 RepID=V5X2Z8_PAEPO
methionyl-tRNA formyltransferase-like protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_09_50_13_curated
SCNpilot_expt_1000_bf_scaffold_101_27
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26167..27294
DNA (1128bp) protein (376aa)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase {ECO:0000313|EMBL:EMR04266.1}; EC=2.6.1.87 {ECO:0000313|EMBL:EMR04266.1};; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NAS5_9BACT
TDP-4-keto-6-deoxy-D-glucose transaminase
SCNpilot_expt_1000_bf_scaffold_101_28
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27341..28270
DNA (930bp) protein (310aa)
Glycosyl transferase, group 2 family n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FM72_9FLAO rbh
B-glycosyltransferase {ECO:0000313|EMBL:KIX20501.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
glycosyl transferase family 2 rbh
SCNpilot_expt_1000_bf_scaffold_101_29
unknown

Not on your lists

comp(28166..28396)
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_101_30
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28411..29868
DNA (1458bp) protein (486aa)
Membrane protein, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFW0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:GAL84631.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
Displaying items 1-30 of 250 in total

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