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SCNpilot_expt_1000_bf_scaffold_429

Search features with annotation key words

Displaying items 1-30 of 131 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_429_1
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(248..925)
DNA (678bp) protein (226aa)
RNA polymerase sigma factor, sigma-70 family protein n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XGJ4_9XANT
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:CCF68324.1}; TaxID=1085630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. punicae str. LMG 859.;"
putative RNA polymerase sigma factor
SCNpilot_expt_1000_bf_scaffold_429_2
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(938..1687)
DNA (750bp) protein (250aa)
Flagellar biosynthetic protein FliP n=2 Tax=Xanthomonas RepID=H1XGJ5_9XANT rbh
Flagellar biosynthetic protein FliP {ECO:0000313|EMBL:CCF68325.1}; TaxID=1085630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. punicae str. LMG 859.;"
fliP; flagellar biosynthesis protein FliP; K02419 flagellar biosynthetic protein FliP
SCNpilot_expt_1000_bf_scaffold_429_3
unknown

Not on your lists

comp(1665..2021)
DNA (357bp) protein (119aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_429_4
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2021..2275)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Xanthomonas arboricola RepID=UPI0002D9F8A3
Uncharacterized protein {ECO:0000313|EMBL:KER81704.1}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;"
flagellar motor switch protein; K02417 flagellar motor switch protein FliN/FliY
SCNpilot_expt_1000_bf_scaffold_429_5
unknown

Not on your lists

2299..3135
DNA (837bp) protein (279aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_429_6
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3077..4234)
DNA (1158bp) protein (386aa)
flagellar hook-basal body protein n=1 Tax=Xanthomonas arboricola RepID=UPI0002DD7910 rbh
Flagellar hook-basal body protein {ECO:0000313|EMBL:KER81706.1}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;"
flagellar hook protein FlgE; K02390 flagellar hook protein FlgE rbh
SCNpilot_expt_1000_bf_scaffold_429_7
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4244..4660)
DNA (417bp) protein (139aa)
flagellar hook capping protein n=1 Tax=Xanthomonas arboricola RepID=UPI0002FE25B0
Flagellar hook capping protein {ECO:0000313|EMBL:KER81707.1}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;"
flagellar hook capping protein; K02389 flagellar basal-body rod modification protein FlgD
SCNpilot_expt_1000_bf_scaffold_429_8
unknown

Not on your lists

comp(4660..5469)
DNA (810bp) protein (270aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_429_9
unknown

Not on your lists

comp(5456..5908)
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_429_10
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5901..7181)
DNA (1281bp) protein (427aa)
ATP synthase {ECO:0000313|EMBL:KHS09035.1}; EC=3.6.3.14 {ECO:0000313|EMBL:KHS09035.1};; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. phaseoli.;"
type III secretion system ATPase, FliI/YscN (EC:3.6.3.14)
ATP synthase n=1 Tax=Xanthomonas axonopodis RepID=UPI0002F09D07 rbh
SCNpilot_expt_1000_bf_scaffold_429_11
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7223..7894)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI000375D2EE
Uncharacterized protein {ECO:0000313|EMBL:KER81711.1}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;"
SCNpilot_expt_1000_bf_scaffold_429_12
unknown

Not on your lists

comp(7881..8297)
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_429_13
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8342..9709)
DNA (1368bp) protein (456aa)
Flagellar M-ring protein FliF n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XLH9_9XANT rbh
Flagellar M-ring protein FliF {ECO:0000313|EMBL:CCF70059.1}; TaxID=1085630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. punicae str. LMG 859.;"
flagellar M-ring protein FliF; K02409 flagellar M-ring protein FliF
SCNpilot_expt_1000_bf_scaffold_429_14
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9718..10014)
DNA (297bp) protein (99aa)
Flagellar hook-basal body complex protein FliE n=2 Tax=Xanthomonas RepID=H8FIM7_XANCI
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=1401257 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. glycines str. 8ra.;"
fliE; flagellar hook-basal body protein FliE; K02408 flagellar hook-basal body complex protein FliE
SCNpilot_expt_1000_bf_scaffold_429_15
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10014..10385)
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Xanthomonas RepID=H1XLI1_9XANT
Uncharacterized protein {ECO:0000313|EMBL:KER81714.1}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;"
flagellar basal-body rod protein flgC; K02388 flagellar basal-body rod protein FlgC
SCNpilot_expt_1000_bf_scaffold_429_16
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10382..10759)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Xanthomonas arboricola RepID=UPI000368BA60
Uncharacterized protein {ECO:0000313|EMBL:KER81715.1}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;"
SCNpilot_expt_1000_bf_scaffold_429_17
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10771..11868)
DNA (1098bp) protein (366aa)
Flagellar P-ring protein n=1 Tax=Xanthomonas citri pv. mangiferaeindicae LMG 941 RepID=H8FIN0_XANCI rbh
Flagellar P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Flags: Precursor;; TaxID=1156940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. mangiferaeindicae LMG 941.;"
flgI; flagellar basal body P-ring protein; K02394 flagellar P-ring protein precursor FlgI rbh
SCNpilot_expt_1000_bf_scaffold_429_18
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11883..12449)
DNA (567bp) protein (189aa)
Flagellar L-ring family protein n=2 Tax=Xanthomonas RepID=H1XLI4_9XANT
Flagellar L-ring family protein {ECO:0000313|EMBL:CCF70064.1}; TaxID=1085630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. punicae str. LMG 859.;"
flagellar L-ring protein 1; K02393 flagellar L-ring protein precursor FlgH
SCNpilot_expt_1000_bf_scaffold_429_19
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12460..13179)
DNA (720bp) protein (240aa)
Flagella basal body P-ring formation protein FlgA n=1 Tax=Xanthomonas citri pv. mangiferaeindicae LMG 941 RepID=H8FIN2_XANCI
Flagella basal body P-ring formation protein FlgA {ECO:0000313|EMBL:CCG38219.1}; TaxID=1156940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. mangiferaeindicae LMG 941.;"
flagella basal body P-ring formation protein flgA
SCNpilot_expt_1000_bf_scaffold_429_20
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13179..13943)
DNA (765bp) protein (255aa)
flagellar hook-basal body protein n=1 Tax=Xanthomonas arboricola RepID=UPI00030E3F81 rbh
Flagellar hook-basal body protein {ECO:0000313|EMBL:KER81719.1}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;"
flagellar basal-body rod protein; K02392 flagellar basal-body rod protein FlgG
SCNpilot_expt_1000_bf_scaffold_429_21
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13956..14621)
DNA (666bp) protein (222aa)
Fagellar hook-basal body s family protein n=1 Tax=Xanthomonas citri pv. mangiferaeindicae LMG 941 RepID=H8FIN4_XANCI
Flagellar hook-basal body protein {ECO:0000313|EMBL:KER81720.1}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;"
flagellar basal-body rod protein; K02392 flagellar basal-body rod protein FlgG
SCNpilot_expt_1000_bf_scaffold_429_22
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14632..16698)
DNA (2067bp) protein (689aa)
flagellar biosynthesis protein FlhA n=1 Tax=Xanthomonas arboricola RepID=UPI0002DD21E4 rbh
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:KER81721.1}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;"
flagellar biosynthesis protein FlhA; K02400 flagellar biosynthesis protein FlhA rbh
SCNpilot_expt_1000_bf_scaffold_429_23
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16695..17759)
DNA (1065bp) protein (355aa)
FlhB n=1 Tax=Xanthomonas arboricola RepID=UPI00030519DF rbh
Flagellar biosynthesis protein FlhB {ECO:0000313|EMBL:KER81722.1}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;"
flagellar biosynthetic protein; K02401 flagellar biosynthetic protein FlhB
SCNpilot_expt_1000_bf_scaffold_429_24
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17759..18523)
DNA (765bp) protein (255aa)
UDP kinase n=1 Tax=Xanthomonas arboricola RepID=UPI0002D2FA3D rbh
UDP kinase {ECO:0000313|EMBL:KER81723.1}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;"
fliR1; flagellar biosynthesis pathway protein FliR; K02421 flagellar biosynthetic protein FliR
SCNpilot_expt_1000_bf_scaffold_429_25
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18528..18791)
DNA (264bp) protein (88aa)
flagellar biosynthesis protein FliQ n=1 Tax=Xanthomonas arboricola RepID=UPI00030ECE48
Bacterial export s, 3 family protein {ECO:0000313|EMBL:CCF70071.1}; TaxID=1085630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. punicae str. LMG 859.;"
fliQ1; flagellar biosynthetic protein FliQ; K02420 flagellar biosynthetic protein FliQ
SCNpilot_expt_1000_bf_scaffold_429_26
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18803..19951)
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Xanthomonas arboricola RepID=UPI0002DD9F0A rbh
Uncharacterized protein {ECO:0000313|EMBL:KER81725.1}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;"
putative tetratricopeptide
SCNpilot_expt_1000_bf_scaffold_429_27
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20143..20526)
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Xanthomonas RepID=H1XIY8_9XANT
Uncharacterized protein {ECO:0000313|EMBL:CCF69168.1}; TaxID=1085630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. punicae str. LMG 859.;"
SCNpilot_expt_1000_bf_scaffold_429_28
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20536..21096)
DNA (561bp) protein (187aa)
Uncharacterized protein n=2 Tax=Xanthomonas RepID=H8FIT6_XANCI
Uncharacterized protein {ECO:0000313|EMBL:EYR70193.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_429_29
unknown

Not on your lists

comp(21461..22504)
DNA (1044bp) protein (348aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_429_30
unknown

Not on your lists

23184..23333
DNA (150bp) protein (50aa)

This feature has no annotations

Displaying items 1-30 of 131 in total

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