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SCNpilot_expt_1000_bf_scaffold_3120

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3120_1
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..1031
DNA (1029bp) protein (343aa)
PF06250 family protein n=1 Tax=Burkholderia multivorans CF2 RepID=J5BQT9_9BURK rbh
PF06250 family protein {ECO:0000313|EMBL:EJO56658.1}; TaxID=985078 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CF2.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_3120_2
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1193..2395)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA010 RepID=U9MC14_PSEAI rbh
Chromate efflux transporter {ECO:0000313|EMBL:KDD60147.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
chromate transporter
SCNpilot_expt_1000_bf_scaffold_3120_3
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2395..2625)
DNA (231bp) protein (77aa)
Arsenical resistance protein ArsH n=1 Tax=Pseudomonas aeruginosa BWHPSA010 RepID=U9MBS1_PSEAI
Arsenical resistance protein ArsH {ECO:0000313|EMBL:KDD60152.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
arsH1; arsenic resistance protein ArsH; K11811 arsenical resistance protein ArsH
SCNpilot_expt_1000_bf_scaffold_3120_4
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2619..3101)
DNA (483bp) protein (161aa)
Arsenical resistance protein ArsH 1 n=3 Tax=Proteobacteria RepID=E3HKQ5_ACHXA
arsH1; arsenic resistance protein ArsH; K11811 arsenical resistance protein ArsH
Arsenical resistance protein ArsH 1 {ECO:0000313|EMBL:ADP14430.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
SCNpilot_expt_1000_bf_scaffold_3120_5
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3094..3516)
DNA (423bp) protein (141aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
arsenate reductase; K00537 arsenate reductase [EC:1.20.4.1]
arsenate reductase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000380FDA2
SCNpilot_expt_1000_bf_scaffold_3120_6
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3533..4609)
DNA (1077bp) protein (359aa)
ACR3 family arsenite transporter n=2 Tax=Burkholderia multivorans RepID=A9AE94_BURM1 rbh
ACR3 family arsenite transporter; K03325 arsenite transporter, ACR3 family rbh
Arsenical-resistance protein {ECO:0000313|EMBL:EJO56667.1}; TaxID=985078 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CF2.;"
SCNpilot_expt_1000_bf_scaffold_3120_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4620..5108)
DNA (489bp) protein (163aa)
ArsR family transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035CEB3D rbh
Protein tyrosine phosphatase {ECO:0000313|EMBL:GAD24912.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
putative protein-tyrosine-phosphatase rbh
SCNpilot_expt_1000_bf_scaffold_3120_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5113..5439)
DNA (327bp) protein (109aa)
ArsR family transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036ECFE7
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:GAD24911.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCNpilot_expt_1000_bf_scaffold_3120_9
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5846..6355
DNA (510bp) protein (170aa)
DNA repair protein n=2 Tax=Burkholderia multivorans RepID=A9AE97_BURM1 rbh
DNA repair protein RadC; K03630 DNA repair protein RadC rbh
PF04002 family protein {ECO:0000313|EMBL:EJO56652.1}; TaxID=985078 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CF2.;"
SCNpilot_expt_1000_bf_scaffold_3120_10
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6635..7021
DNA (387bp) protein (129aa)
Putative vacuolar-type H+ATPase subunit A n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WX92_PSEDE
putative vacuolar-type H+ATPase subunit A
Putative vacuolar-type H+ATPase subunit A {ECO:0000313|EMBL:AGI23846.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denitrificans ATCC 13867.;"
SCNpilot_expt_1000_bf_scaffold_3120_11
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7787..8614
DNA (828bp) protein (276aa)
Gene 32 protein n=2 Tax=Burkholderia multivorans RepID=A9AE99_BURM1 rbh
PF06067 domain protein {ECO:0000313|EMBL:KCB38660.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_3120_12
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8687..10735
DNA (2049bp) protein (683aa)
ParB-like partition protein n=1 Tax=Aeromonas hydrophila SSU RepID=K1JAJ3_AERHY rbh
ParB-like partition protein {ECO:0000313|EMBL:EKB27261.1}; TaxID=1073377 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila SSU.;"
putative chromosome segregation protein; K03497 chromosome partitioning protein, ParB family rbh
SCNpilot_expt_1000_bf_scaffold_3120_13
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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comp(10881..12038)
DNA (1158bp) protein (386aa)
Uncharacterized protein id=4237051 bin=GWC2_Nitrospirae_57_13 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8 rbh
hypothetical protein
Tax=GWC2_Nitrospirae_57_13_curated
SCNpilot_expt_1000_bf_scaffold_3120_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12026..14218)
DNA (2193bp) protein (731aa)
Stem cell self-renewal protein Piwi domain-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4ML19_9BURK rbh
Stem cell self-renewal protein Piwi domain-containing protein {ECO:0000313|EMBL:EIK89909.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
piwi domain-containing protein rbh
SCNpilot_expt_1000_bf_scaffold_3120_15
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14231..14920)
DNA (690bp) protein (230aa)
Type II restriction enzyme n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XNH9_DESMR
type II restriction enzyme
Type II restriction enzyme {ECO:0000313|EMBL:BAH74954.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
SCNpilot_expt_1000_bf_scaffold_3120_16
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14972..16720)
DNA (1749bp) protein (583aa)
Modification methylase PaeR7I n=2 Tax=Gammaproteobacteria RepID=S1HWV4_ECOLX rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
SCNpilot_expt_1000_bf_scaffold_3120_17
R_Proteobacteria_53_8, Proteobacteria, Bacteria

Not on your lists

comp(16717..16854)
DNA (138bp) protein (46aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000381D287
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
Displaying 17 items

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