name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_189_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..1531)
|
ribonucleoside-diphosphate reductase 2 alpha chain; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Coenzyme B12-dependent class II ribonucleotide reductase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QNM8_9BRAD
Vitamin B12-dependent ribonucleotide reductase {ECO:0000313|EMBL:KFC70336.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
|
|
SCNpilot_expt_1000_bf_scaffold_189_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1479..2123)
|
nrd; ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent, large subunit (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZR3_9RHIZ
Vitamin B12-dependent ribonucleotide reductase {ECO:0000313|EMBL:KFC70336.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
|
|
SCNpilot_expt_1000_bf_scaffold_189_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2889..3299
|
NADH dehydrogenase; K00356 NADH dehydrogenase [EC:1.6.99.3]
NADH-ubiquinone oxidoreductase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000316460B
NADH:ubiquinone oxidoreductase 17.2 kD subunit {ECO:0000313|EMBL:KFC70335.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
|
|
SCNpilot_expt_1000_bf_scaffold_189_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3472..4092
|
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI0003818B33
Uncharacterized protein {ECO:0000313|EMBL:KFC70332.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_189_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4370..5335
|
Peptide chain release factor 2 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZT0_9RHIZ
rbh
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K02836 peptide chain release factor 2
|
|
SCNpilot_expt_1000_bf_scaffold_189_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5405..6724)
|
Putative metalloendopeptidase {ECO:0000313|EMBL:KFC68931.1}; EC=3.4.24.- {ECO:0000313|EMBL:KFC68931.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Metalloendopeptidase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z8I0_9BRAD
metalloendopeptidase
|
|
SCNpilot_expt_1000_bf_scaffold_189_7
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria
|
Not on your lists |
6846..7430
|
Uncharacterized protein {ECO:0000313|EMBL:KIJ72219.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
|
|
SCNpilot_expt_1000_bf_scaffold_189_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7602..11054
|
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZT3_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC68929.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_189_9
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11085..12422)
|
Tyrosine-tRNA ligase TyrS {ECO:0000313|EMBL:AEI06737.1}; EC=6.1.1.1 {ECO:0000313|EMBL:AEI06737.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Tyrosine--tRNA ligase n=2 Tax=Oligotropha carboxidovorans RepID=B6JHE4_OLICO
|
|
SCNpilot_expt_1000_bf_scaffold_189_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12474..13145)
|
alpha/beta hydrolase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FFAF32
rbh
Putative hydrolase of the alpha/beta superfamily protein {ECO:0000313|EMBL:KFC68927.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K07018
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_189_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13440..14642
|
Cysteine desulfurase family protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZT7_9RHIZ
rbh
Cysteine desulfurase {ECO:0000313|EMBL:KFC68926.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
|
|
SCNpilot_expt_1000_bf_scaffold_189_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14703..15476
|
FeS assembly protein SufB n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CQJ3_9RHOB
Cysteine desulfurase activator complex subunit SufB {ECO:0000313|EMBL:KFC68925.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cysteine desulfurase activator complex subunit SufB; K09014 Fe-S cluster assembly protein SufB
|
|
SCNpilot_expt_1000_bf_scaffold_189_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15464..16153
|
cysteine desulfarase n=1 Tax=Methylopila sp. M107 RepID=UPI00037C7908
Cysteine desulfurase activator complex subunit SufB {ECO:0000313|EMBL:KFC68925.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
FeS assembly protein SufB; K09014 Fe-S cluster assembly protein SufB
|
|
SCNpilot_expt_1000_bf_scaffold_189_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16266..17018
|
transporter n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI0003705216
rbh
FeS assembly ATPase SufC {ECO:0000313|EMBL:KFC68924.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
FeS assembly ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_189_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17018..18367
|
FeS assembly protein SufD n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IBN7_BEII9
rbh
FeS assembly protein SufD {ECO:0000313|EMBL:KFC68923.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
FeS assembly protein SufD; K09015 Fe-S cluster assembly protein SufD
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_189_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19077..19781
|
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SufS subfamily cysteine desulfurase; K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
cysteine desulfurase n=1 Tax=Methylobacterium sp. 77 RepID=UPI000367D099
|
|
SCNpilot_expt_1000_bf_scaffold_189_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19836..20174
|
FeS assembly SUF system protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IRX2_METNO
Uncharacterized protein {ECO:0000313|EMBL:KFC68920.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
FeS assembly SUF system protein
|
|
SCNpilot_expt_1000_bf_scaffold_189_18
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20284..21078)
|
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Acidovorax sp. CF316 RepID=J1ECW3_9BURK
rbh
Bradyrhizobium elkanii strain UASWS1015 Contig182, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46241.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_189_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21232..21744
|
Free methionine-R-sulfoxide reductase {ECO:0000313|EMBL:KFC75359.1}; EC=1.8.4.14 {ECO:0000313|EMBL:KFC75359.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
GAF domain-containing protein n=1 Tax=Rhizobium sp. CF142 RepID=J1T125_9RHIZ
hypothetical protein; K07170 GAF domain-containing protein
|
|
SCNpilot_expt_1000_bf_scaffold_189_20
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21755..22105
|
UPI0003D010C1 related cluster n=1 Tax=unknown RepID=UPI0003D010C1
putative transcriptional regulator, ModE family; K02019 molybdate transport system regulatory protein
ModE family transcriptional regulator {ECO:0000313|EMBL:ESZ23477.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
|
|
SCNpilot_expt_1000_bf_scaffold_189_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22215..22493
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PBL9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KFC61597.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
transglycosylase-associated protein
|
|
SCNpilot_expt_1000_bf_scaffold_189_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22591..23616
|
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Lipoyl synthase n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=LIPA_METPB
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_189_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23629..24102
|
Cyclase/dehydrase n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y0N5_9RHIZ
Cyclase/dehydrase {ECO:0000313|EMBL:KFC61599.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cyclase/dehydrase
|
|
SCNpilot_expt_1000_bf_scaffold_189_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24107..24604)
|
CinA domain protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QHC3_BRESC
CinA protein {ECO:0000313|EMBL:KFC61600.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
damage inducible protein CinA; K03743
|
|
SCNpilot_expt_1000_bf_scaffold_189_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24607..25809)
|
4-diphosphocytidyl-2C-methyl-D-erythritol synthase; K12506 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
Bifunctional enzyme IspD/IspF n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=ISPDF_AZOC5
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
|
|
SCNpilot_expt_1000_bf_scaffold_189_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25988..26977
|
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
tRNA-dihydrouridine synthase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z0L9_9RHIZ
NifR3 family TIM-barrel protein
|
|
SCNpilot_expt_1000_bf_scaffold_189_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26998..28131
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
nitrogen-specific signal transduction histidine kinase NtrB; K07708 two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
rbh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000308BCB3
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_189_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28147..29598
|
Nitrogen metabolism transcriptional regulator, NtrC, Fis Family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IDE2_METNO
rbh
Nitrogen assimilation regulatory protein {ECO:0000313|EMBL:KFC61604.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Fis family nitrogen metabolism transcriptional regulator NtrC; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_189_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29709..32027
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
multi-sensor signal transduction histidine kinase; K13598 two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
rbh
Multi-sensor signal transduction histidine kinase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UIY1_METS4
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_189_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32024..33391
|
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IDE6_METNO
rbh
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:KFC61606.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Fis family two component sigma54 specific transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX
rbh
|