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SCNpilot_expt_1000_bf_scaffold_209

Search features with annotation key words

Displaying items 1-30 of 575 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_209_1
unknown

Not on your lists

1..90
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_209_2
unknown

Not on your lists

comp(87..188)
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_209_3
unknown

Not on your lists

comp(799..1245)
DNA (447bp) protein (149aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_209_4
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1802..3100
DNA (1299bp) protein (433aa)
D-serine deaminase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DJP5_BRAJP rbh
D-serine deaminase rbh
D-serine deaminase {ECO:0000313|EMBL:BAL11105.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_expt_1000_bf_scaffold_209_5
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3108..3767
DNA (660bp) protein (220aa)
ABC transporter permease n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035EFBBB rbh
ABC transporter permease; K02029 polar amino acid transport system permease protein rbh
ABC transporter permease protein {ECO:0000313|EMBL:BAC49245.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_expt_1000_bf_scaffold_209_6
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3783..4433
DNA (651bp) protein (217aa)
amino acid ABC transporter permease n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031184AF rbh
Putative ABC transporter permease protein {ECO:0000313|EMBL:KGJ69528.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
ABC transporter permease; K02029 polar amino acid transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_209_7
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4420..5148
DNA (729bp) protein (243aa)
amino acid ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000379E86F rbh
glnQ; glutamine ABC transporter; ATP-binding component rbh
ABC-type polar amino acid transport system, ATPase component {ECO:0000313|EMBL:EJN09499.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
SCNpilot_expt_1000_bf_scaffold_209_8
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5190..5984
DNA (795bp) protein (265aa)
ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035DAA54 rbh
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EJN09500.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
ABC transporter substrate-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_209_9
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6083..7111
DNA (1029bp) protein (343aa)
Putative deacylase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QAB2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ69524.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
hypothetical protein; K06987 rbh
SCNpilot_expt_1000_bf_scaffold_209_10
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7137..8189
DNA (1053bp) protein (351aa)
Bacterial regulatory protein, LacI family protein 4 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HLI7_ACHXA rbh
LacI family transcriptional regulator; K06145 LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor rbh
Bacterial regulatory protein, LacI family protein 4 {ECO:0000313|EMBL:ADP18188.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
SCNpilot_expt_1000_bf_scaffold_209_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8249..8872)
DNA (624bp) protein (208aa)
hydrolase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037D4783
Putative esterase {ECO:0000313|EMBL:KFC65255.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K06999 phospholipase/carboxylesterase
SCNpilot_expt_1000_bf_scaffold_209_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8952..9884)
DNA (933bp) protein (311aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A3P5_STAND rbh
Glyoxalase family protein {ECO:0000313|EMBL:KFC65254.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glyoxalase/bleomycin resistance protein/dioxygenase; K15975 glyoxalase family protein rbh
SCNpilot_expt_1000_bf_scaffold_209_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10111..10536
DNA (426bp) protein (142aa)
Putative membrane protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQA7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC65253.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
DoxD-like protein; K15977 putative oxidoreductase
SCNpilot_expt_1000_bf_scaffold_209_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10866..11597
DNA (732bp) protein (244aa)
Transcriptional regulator, LysR family n=1 Tax=Rhodovulum sp. PH10 RepID=J6JDW8_9RHOB
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KFC65252.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
LysR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_209_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11607..12113)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TN15_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KFC69285.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_209_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12291..12461
DNA (171bp) protein (57aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC65251.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_209_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12471..12788)
DNA (318bp) protein (106aa)
Molecular chaperone, SugES-like protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJP5_9RHIZ
Small multidrug resistance protein {ECO:0000313|EMBL:KFC65250.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
small multidrug resistance protein; K11741 quaternary ammonium compound-resistance protein SugE
SCNpilot_expt_1000_bf_scaffold_209_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12969..13496)
DNA (528bp) protein (176aa)
Putative transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z0A6_9RHIZ
Transcriptional regulator, MerR family {ECO:0000313|EMBL:KFC65248.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
MerR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_209_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13493..13807)
DNA (315bp) protein (105aa)
integration host factor subunit alpha n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E38615
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ihfA; integration host factor subunit alpha; K04764 integration host factor subunit alpha
SCNpilot_expt_1000_bf_scaffold_209_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14001..14978)
DNA (978bp) protein (326aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] rbh
3-oxoacyl-ACP synthase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00035CB2E8
SCNpilot_expt_1000_bf_scaffold_209_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14991..16049)
DNA (1059bp) protein (353aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source
plsX; Fatty acid/phospholipid synthesis protein; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] rbh
Phosphate acyltransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z0A3_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_209_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16222..16782)
DNA (561bp) protein (187aa)
metal-binding protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00035E530D
Uncharacterized protein {ECO:0000313|EMBL:KFC65244.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_209_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16772..17314)
DNA (543bp) protein (181aa)
ubiquinol-cytochrome C chaperone n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00036D41F3
Ubiquinol-cytochrome C chaperone {ECO:0000313|EMBL:KFC65243.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_209_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17462..17956
DNA (495bp) protein (165aa)
Small protein A (TmRNA-binding) n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z0A0_9RHIZ
SmpA/OmlA domain protein {ECO:0000313|EMBL:KFC65242.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SmpA/OmlA domain-containing protein
SCNpilot_expt_1000_bf_scaffold_209_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18033..18959)
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0G1R5_RHIML
DMT superfamily permease {ECO:0000313|EMBL:KFC65241.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_209_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19157..19966)
DNA (810bp) protein (270aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hppa; H+ translocating pyrophosphate synthase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1]
pyrophosphatase n=1 Tax=Kaistia granuli RepID=UPI000372D73F
SCNpilot_expt_1000_bf_scaffold_209_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19963..21252)
DNA (1290bp) protein (430aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hppA; membrane-bound proton-translocating pyrophosphatase; K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1]
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UHS8_METS4
SCNpilot_expt_1000_bf_scaffold_209_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21464..22252)
DNA (789bp) protein (263aa)
hypothetical protein; K14977 ureidoglycine aminohydrolase [EC:3.5.3.-] rbh
Blr0253 protein n=2 Tax=Bradyrhizobium diazoefficiens RepID=Q89XQ5_BRADU rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC65239.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_209_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22307..23509)
DNA (1203bp) protein (401aa)
Arabinose efflux permease family protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z098_9RHIZ rbh
Thioredoxin 2 {ECO:0000313|EMBL:KFC65238.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_209_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23546..24544)
DNA (999bp) protein (333aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
thiamine-monophosphate kinase; K00946 thiamine-monophosphate kinase [EC:2.7.4.16] rbh
Thiamine-monophosphate kinase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UHS7_METS4 rbh
Displaying items 1-30 of 575 in total

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