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SCNpilot_expt_1000_bf_scaffold_222

Search features with annotation key words

Displaying items 1-30 of 112 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_222_1
unknown

Not on your lists

comp(337..771)
DNA (435bp) protein (145aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_222_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1030..1830
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030D6604
Uncharacterized protein {ECO:0000313|EMBL:KFC63446.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_222_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1834..2322)
DNA (489bp) protein (163aa)
Uncharacterized protein n=122 Tax=Pseudomonas RepID=B7UVL8_PSEA8
Histidinol-phosphate aminotransferase {ECO:0000313|EMBL:KFC63445.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_222_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2319..2597)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XB27_VARPD
Uncharacterized protein {ECO:0000313|EMBL:KFC63444.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_222_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2601..3785)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PD23_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KFC63443.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
low termperature growth protein
SCNpilot_expt_1000_bf_scaffold_222_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3861..4937)
DNA (1077bp) protein (359aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
IMP cyclohydrolase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F4C642
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_222_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4888..5430)
DNA (543bp) protein (181aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
Bifunctional purine biosynthesis protein PurH n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMM0_9RHIZ
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_222_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5525..7246)
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E142B8 rbh
Heparinase II/III family protein {ECO:0000313|EMBL:KFC63441.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
heparinase II/III family protein rbh
SCNpilot_expt_1000_bf_scaffold_222_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7359..8711)
DNA (1353bp) protein (451aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000313|EMBL:KFC63440.1}; EC=2.1.1.- {ECO:0000313|EMBL:KFC63440.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
sun protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] rbh
Sun protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ESQ4_METSB rbh
SCNpilot_expt_1000_bf_scaffold_222_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8725..9672)
DNA (948bp) protein (316aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
peptidase family M48; K03799 heat shock protein HtpX [EC:3.4.24.-]
hypothetical protein, partial n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000363D2E8 rbh
SCNpilot_expt_1000_bf_scaffold_222_11
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9797..10015
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IK52_METNO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL60065.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_expt_1000_bf_scaffold_222_12
unknown

Not on your lists

comp(10046..10279)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_222_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10485..11867
DNA (1383bp) protein (461aa)
Putative enzyme {ECO:0000313|EMBL:KFC63437.1}; EC=2.1.1.- {ECO:0000313|EMBL:KFC63437.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cyclopropane-fatty-acyl-phospholipid synthase; K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] rbh
Methyltransferase, cyclopropane fatty acid synthase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMM9_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_222_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11938..12255)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003005048
Uncharacterized protein {ECO:0000313|EMBL:KFC63436.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_222_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12486..13433
DNA (948bp) protein (316aa)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:KFC63435.1}; EC=1.1.1.95 {ECO:0000313|EMBL:KFC63435.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain-containing protein 8 (EC:1.1.1.-) rbh
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain-containing protein 8 n=1 Tax=Pseudomonas psychrotolerans L19 RepID=H0J878_9PSED rbh
SCNpilot_expt_1000_bf_scaffold_222_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13434..13958)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000371B4CA
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:KFC63434.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ErfK/YbiS/YcfS/YnhG family protein
SCNpilot_expt_1000_bf_scaffold_222_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14092..14856)
DNA (765bp) protein (255aa)
Hemin import ATP-binding protein HmuV {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041307}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041330};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter-like protein; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI000363F8BA
SCNpilot_expt_1000_bf_scaffold_222_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14909..16015)
DNA (1107bp) protein (369aa)
heme ABC transporter permease n=1 Tax=Methylobacterium sp. 88A RepID=UPI00036672E9 rbh
HmuU protein {ECO:0000313|EMBL:KFC63430.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
transport system permease; K02015 iron complex transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_222_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16012..16965)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002F8FEB6
Periplasmic hemin-binding protein {ECO:0000313|EMBL:KFC63429.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_222_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17252..17599
DNA (348bp) protein (116aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QLM5_METTR
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:KFC63427.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
antibiotic biosynthesis monooxygenase
SCNpilot_expt_1000_bf_scaffold_222_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17612..18133
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI00031F8716
Coproporphyrinogen III oxidase {ECO:0000313|EMBL:KFC63426.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K07227 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_222_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18268..19716
DNA (1449bp) protein (483aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC63417.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_222_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19718..20440)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FE36B6 rbh
Protein tyrosine/serine phosphatase {ECO:0000313|EMBL:KFC63416.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
protein tyrosine/serine phosphatase rbh
SCNpilot_expt_1000_bf_scaffold_222_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20593..21132
DNA (540bp) protein (180aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ppa; inorganic pyrophosphatase (EC:3.6.1.1); K01507 inorganic pyrophosphatase [EC:3.6.1.1]
Inorganic pyrophosphatase n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8ADL8_RHIRD
SCNpilot_expt_1000_bf_scaffold_222_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21192..22067)
DNA (876bp) protein (292aa)
Putative citrate lyase beta chain protein CitE {ECO:0000313|EMBL:KFC63414.1}; EC=4.1.3.34 {ECO:0000313|EMBL:KFC63414.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
HpcH/HpaI aldolase/citrate lyase family protein; K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34] rbh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E09225 rbh
SCNpilot_expt_1000_bf_scaffold_222_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22159..23871
DNA (1713bp) protein (571aa)
pyridoxal-5'-phosphate-dependent protein subunit beta; K01754 threonine dehydratase [EC:4.3.1.19]
Threonine dehydratase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZH3_9RHIZ rbh
Threonine dehydratase {ECO:0000313|EMBL:KFC63413.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_222_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23969..25030
DNA (1062bp) protein (354aa)
MaoC domain protein dehydratase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IQ36_METNO rbh
MaoC-like dehydratase {ECO:0000313|EMBL:KFC63412.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
MaoC domain-containing protein dehydratase; K14449 mesaconyl-CoA hydratase rbh
SCNpilot_expt_1000_bf_scaffold_222_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25183..25584
DNA (402bp) protein (134aa)
Succinate dehydrogenase, cytochrome b556 subunit n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ILL0_METNO
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:KFC63411.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
succinate dehydrogenase, cytochrome b556 subunit; K00241 succinate dehydrogenase cytochrome b556 subunit
SCNpilot_expt_1000_bf_scaffold_222_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25596..25988
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031D7638
Succinate dehydrogenase, hydrophobic membrane anchor protein {ECO:0000313|EMBL:KFC63410.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
succinate dehydrogenase, hydrophobic membrane anchor protein; K00242 succinate dehydrogenase membrane anchor subunit
SCNpilot_expt_1000_bf_scaffold_222_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25993..27825
DNA (1833bp) protein (611aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1]
succinate dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000305D55F
Displaying items 1-30 of 112 in total

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