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SCNpilot_expt_1000_bf_scaffold_423

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_423_1
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..306
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti (strain SM11) RepID=F7X3H6_SINMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH78380.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
SCNpilot_expt_1000_bf_scaffold_423_2
unknown

Not on your lists

303..542
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_423_3
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

666..1103
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7KYX0_METC4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK81243.1}; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain CM4 / NCIMB 13688); (Methylobacterium chloromethanicum).;"
SCNpilot_expt_1000_bf_scaffold_423_4
unknown

Not on your lists

1081..1458
DNA (378bp) protein (126aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_423_5
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1517..1759
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003725236
Uncharacterized protein {ECO:0000313|EMBL:KGJ70032.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_423_6
unknown

Not on your lists

comp(2198..2560)
DNA (363bp) protein (121aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_423_7
unknown

Not on your lists

comp(2563..2865)
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_423_8
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3030..4307
DNA (1278bp) protein (426aa)
integrase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6BA41
Putative integrase {ECO:0000313|EMBL:KFG90031.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
putative integrase
SCNpilot_expt_1000_bf_scaffold_423_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4640..4927
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYS8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC75155.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_423_10
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5002..5508
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YN11_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM25353.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_423_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5592..6053
DNA (462bp) protein (154aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC67552.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_423_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6155..7138
DNA (984bp) protein (328aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YW80_9RHIZ rbh
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:KFC67553.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
twin-arginine translocation pathway signal rbh
SCNpilot_expt_1000_bf_scaffold_423_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7269..8042
DNA (774bp) protein (258aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
NAD(+) kinase (EC:2.7.1.23); K00858 NAD+ kinase [EC:2.7.1.23] rbh
inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000301A8A6 rbh
SCNpilot_expt_1000_bf_scaffold_423_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8047..9261)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U859_METS4 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC67555.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_423_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9258..10319)
DNA (1062bp) protein (354aa)
lytic transglycosylase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00035EE685 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC67556.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_423_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10514..11011
DNA (498bp) protein (166aa)
Acyl dehydratase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YW77_9RHIZ
Acyl dehydratase {ECO:0000313|EMBL:KFC67557.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
dehydratase
SCNpilot_expt_1000_bf_scaffold_423_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11017..11895
DNA (879bp) protein (293aa)
citrate (pro-3S)-lyase; K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34] rbh
Citrate lyase beta subunit n=1 Tax=Microvirga sp. WSM3557 RepID=I4YW76_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC67558.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_423_18
unknown

Not on your lists

11915..12133
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_423_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12238..12843)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F0E660
FMN-binding flavin reductase-like protein {ECO:0000313|EMBL:KFC67560.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
conserved protein of DIM6/NTAB family
SCNpilot_expt_1000_bf_scaffold_423_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12847..13416)
DNA (570bp) protein (190aa)
NAD(P)H nitroreductase n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003632242
Uncharacterized protein {ECO:0000313|EMBL:KFC67561.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_423_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13631..14575
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IKG2_METNO rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC67562.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_423_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14594..15235)
DNA (642bp) protein (214aa)
Esterase/acetylhydrolase (Modular protein) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AVS4_AZOBR
Putative esterase/acetylhydrolase secreted protein {ECO:0000313|EMBL:KFC67563.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
esterase/acetylhydrolase; (modular protein)
SCNpilot_expt_1000_bf_scaffold_423_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15346..16569)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RYH2_9BURK
Putative OpgC protein {ECO:0000313|EMBL:KFC67564.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
OpgC protein
SCNpilot_expt_1000_bf_scaffold_423_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16825..17442)
DNA (618bp) protein (206aa)
Putative membrane-anchored protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I5D5_9BRAD
Putative membrane-anchored protein {ECO:0000313|EMBL:KFC67565.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_423_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17439..18728)
DNA (1290bp) protein (430aa)
Bll0406 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89XA8_BRADU
Putative membrane protein {ECO:0000313|EMBL:KFC67566.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_423_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18825..20822)
DNA (1998bp) protein (666aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
thrS; threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3]
Threonine--tRNA ligase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z2Y2_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_423_27
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21065..21295
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A0W6_STAND
Uncharacterized protein {ECO:0000313|EMBL:KHK00896.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_423_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21261..21707)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000367136C
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K08998 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_423_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21724..22455
DNA (732bp) protein (244aa)
Acid phosphatase {ECO:0000256|PIRNR:PIRNR000897}; EC=3.1.3.2 {ECO:0000256|PIRNR:PIRNR000897};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Phosphoesterase PA-phosphatase related protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FVK7_PHAMO
membrane-associated phospholipid phosphatase
SCNpilot_expt_1000_bf_scaffold_423_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22456..22902)
DNA (447bp) protein (149aa)
Nitrogen-fixing NifU-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMS4_NITHX
Nitrogen-fixing NifU domain protein {ECO:0000313|EMBL:KFC67570.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
nitrogen-fixing NifU-like
Displaying items 1-30 of 69 in total

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