name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_541_1
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..171
|
RNA polymerase sigma factor RpoD n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UHQ0_METS4
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
|
|
SCNpilot_expt_1000_bf_scaffold_541_2
unknown
|
Not on your lists |
399..947
|
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035F2447
|
|
SCNpilot_expt_1000_bf_scaffold_541_3
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1043..1654
|
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000372FE55
Lysine transporter LysE {ECO:0000313|EMBL:KGM32374.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
lysine exporter protein LysE/YggA
|
|
SCNpilot_expt_1000_bf_scaffold_541_4
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1662..2084
|
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPM6_9RHIZ
Secondary thiamine-phosphate synthase enzyme {ECO:0000313|EMBL:EJL57356.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_541_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2088..2378)
|
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003612B97
Uncharacterized protein {ECO:0000313|EMBL:KFC73918.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_541_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2573..2860
|
Uncharacterized protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6WZK1_OCHA4
Uncharacterized protein {ECO:0000313|EMBL:KFC73914.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_541_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2943..3503
|
Pfpi family intracellular protease; K05520 protease I [EC:3.2.-.-]
Intracellular protease, PfpI family n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QJE7_RHOPT
Intracellular protease, PfpI family {ECO:0000313|EMBL:ACF00029.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_541_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3675..4928
|
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D3647B
rbh
Putative oxalate/formate antiporter {ECO:0000313|EMBL:KFC73910.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
major facilitator superfamily protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_541_9
unknown
|
Not on your lists |
comp(4910..5032)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_541_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5074..5493
|
Acyl-CoA thioester hydrolase {ECO:0000313|EMBL:KFC73908.1}; EC=3.1.2.- {ECO:0000313|EMBL:KFC73908.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
thioesterase superfamily protein; K10806 acyl-CoA thioesterase YciA [EC:3.1.2.-]
Thioesterase superfamily protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZB72_METPB
|
|
SCNpilot_expt_1000_bf_scaffold_541_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5764..8172
|
Methyl-accepting chemotaxis protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBP5_PELHB
Putative methyl-accepting chemotaxis protein MCP {ECO:0000313|EMBL:KFC73906.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein
|
|
SCNpilot_expt_1000_bf_scaffold_541_12
unknown
|
Not on your lists |
comp(8452..9576)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_541_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9721..12873)
|
Resistance nodulation cell division (RND) drug efflux pump, inner membrane component n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LNA6_RHITR
resistance nodulation cell division (RND) drug efflux pump, inner membrane component
Resistance nodulation cell division (RND) drug efflux pump, inner membrane component {ECO:0000313|EMBL:AGB72873.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_1000_bf_scaffold_541_14
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12870..16034)
|
acriflavine resistance protein B n=1 Tax=Methylocystis rosea RepID=UPI00037E135E
rbh
acriflavin resistance protein
rbh
Acriflavin resistance protein {ECO:0000313|EMBL:CCJ08298.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
|
|
SCNpilot_expt_1000_bf_scaffold_541_15
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16048..17505)
|
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003715FA5
rbh
Multidrug resistance protein mdtA (Multidrug transporter mdtA) {ECO:0000313|EMBL:CCE03897.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
mdtA; multidrug ABC transporter; K07799 putative multidrug efflux transporter MdtA
|
|
SCNpilot_expt_1000_bf_scaffold_541_16
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17502..18986)
|
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Rhodovulum sp. PH10 RepID=J6UH55_9RHOB
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:EJW13276.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
RND efflux system outer membrane lipoprotein NodT
|
|
SCNpilot_expt_1000_bf_scaffold_541_17
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19330..20238
|
Putative cbpA-like protein n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5B5I3_METEA
rbh
putative cbpA-like protein
rbh
Putative cbpA-like protein {ECO:0000313|EMBL:ACS43715.1}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_541_18
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20235..20516
|
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5B5I2_METEA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS43714.1}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_541_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20570..20797
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PE99_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39876.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_expt_1000_bf_scaffold_541_20
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20927..21181
|
Uncharacterized protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JP41_AGRRK
Uncharacterized protein {ECO:0000313|EMBL:EYR84578.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_541_21
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21244..21438
|
Uncharacterized protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JP42_AGRRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM29322.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
|
|
SCNpilot_expt_1000_bf_scaffold_541_22
unknown
|
Not on your lists |
21492..21596
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_541_23
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21593..22873
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PEA4_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS39881.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
NADH dehydrogenase, FAD-containing subunit
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_541_24
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22993..24294)
|
Uncharacterized protein DUF214 n=1 Tax=Rhodovulum sp. PH10 RepID=J6UD67_9RHOB
rbh
Uncharacterized protein DUF214 {ECO:0000313|EMBL:EJW11376.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein; K02004 putative ABC transport system permease protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_541_25
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24294..25004)
|
ABC transporter ATP-binding protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWA8_RUBGI
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAL97295.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
|
|
SCNpilot_expt_1000_bf_scaffold_541_26
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24982..25446)
|
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWA7_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL97294.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
|
|
SCNpilot_expt_1000_bf_scaffold_541_27
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25515..27263)
|
Alkaline phosphatase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PKS8_9RHOB
rbh
Alkaline phosphatase {ECO:0000313|EMBL:EJW11372.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
|
|
SCNpilot_expt_1000_bf_scaffold_541_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27544..28764
|
Major facilitator superfamily MFS_1 n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UA27_METS4
rbh
Fosmidomycin resistance protein {ECO:0000313|EMBL:KFC71579.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
major facilitator transporter; K08223 MFS transporter, FSR family, fosmidomycin resistance protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_541_29
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28843..29589)
|
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
Superoxide dismutase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RL70_9PROT
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_541_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29832..31334
|
Putative chemotaxis protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D5W0_9RHIZ
rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:KFC73873.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
methyl-accepting chemotaxis sensory transducer
|