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SCNpilot_expt_1000_bf_scaffold_632

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_632_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

216..338
DNA (123bp) protein (41aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00035E56DB
DNA repair protein RadC {ECO:0000313|EMBL:KFC67608.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_632_2
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

354..719
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A960_RHIFH
Uncharacterized protein {ECO:0000313|EMBL:KEC77437.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_632_3
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(743..1180)
DNA (438bp) protein (146aa)
Lactoylglutathione lyase-like lyase n=2 Tax=Rhizobium sp. CF122 RepID=J3BHZ6_9RHIZ
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:EJL51881.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
lactoylglutathione lyase family protein
SCNpilot_expt_1000_bf_scaffold_632_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1463..2878
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) PF5_METNO">RepID=B8IPF5_METNO rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC67609.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_632_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2949..3890
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) PF6_METNO">RepID=B8IPF6_METNO rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC67610.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_632_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3961..4785
DNA (825bp) protein (275aa)
Transglutaminase domain protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1Z7A0_METPB
Transglutaminase domain protein {ECO:0000313|EMBL:KFC67611.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
transglutaminase
SCNpilot_expt_1000_bf_scaffold_632_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4831..5580
DNA (750bp) protein (250aa)
Putative proteasome-type protease n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) PF9_METNO">RepID=B8IPF9_METNO rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC67612.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative proteasome-type protease; K07395 putative proteasome-type protease rbh
SCNpilot_expt_1000_bf_scaffold_632_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5719..7878
DNA (2160bp) protein (720aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E07117 rbh
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:KFC67613.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
diguanylate cyclase/phosphodiesterase
SCNpilot_expt_1000_bf_scaffold_632_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7894..8454)
DNA (561bp) protein (187aa)
Putative ABC-type transport system, permease component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNV8_9RHIZ
Exopolysaccharide synthesis, ExoD {ECO:0000313|EMBL:KFC67614.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
exopolysaccharide synthesis ExoD
SCNpilot_expt_1000_bf_scaffold_632_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8573..8842)
DNA (270bp) protein (90aa)
Usg family protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U8V7_METS4
Usg protein, probable subunit of phosphoribosylanthranilate isomerase {ECO:0000313|EMBL:KFC67615.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Usg family protein
SCNpilot_expt_1000_bf_scaffold_632_11
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9001..9738
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LG53_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIZ83729.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_632_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9757..11358)
DNA (1602bp) protein (534aa)
4-diphosphocytidyl-2C-methyl-D-erythritol synthase; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
MobA-related protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QPE3_9BRAD
Molybdenum cofactor cytidylyltransferase / molybdopterin molybdochelatase {ECO:0000313|EMBL:KFC67616.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_632_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11372..12064)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FEFB3D rbh
Putative sulfurylase large subunit, molybdopterin cytosine dinucleotide biosynthesis {ECO:0000313|EMBL:KFC67617.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
xanthine and CO dehydrogenase maturation factor; K07402 xanthine dehydrogenase accessory factor rbh
SCNpilot_expt_1000_bf_scaffold_632_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12069..12698)
DNA (630bp) protein (210aa)
Amino acid transporter n=2 Tax=Labrenzia RepID=U7GKI4_9RHOB
Amidase {ECO:0000313|EMBL:KFC67618.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
RhtB family transporter
SCNpilot_expt_1000_bf_scaffold_632_15
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12698..13036)
DNA (339bp) protein (113aa)
XdhC/CoxI family protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI000365E718
XdhC protein {ECO:0000313|EMBL:BAQ45211.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_632_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13084..14283)
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DC694F rbh
VWA containing CoxE family protein {ECO:0000313|EMBL:KFC67620.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
VWA containing CoxE family protein; K07161 rbh
SCNpilot_expt_1000_bf_scaffold_632_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14280..14660)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00037B0FE1
Phosphoglycerate kinase {ECO:0000313|EMBL:KFC67621.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_632_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14706..15620)
DNA (915bp) protein (305aa)
ATPase associated with various cellular activities AAA_5 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IR40_METNO
AAA_5 ATPase {ECO:0000313|EMBL:KFC67622.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ATPase
SCNpilot_expt_1000_bf_scaffold_632_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15740..16543)
DNA (804bp) protein (268aa)
Carbon monoxide dehydrogenase medium chain {ECO:0000313|EMBL:KFC67624.1}; EC=1.2.99.2 {ECO:0000313|EMBL:KFC67624.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
FAD-binding molybdopterin dehydrogenase; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] rbh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F6E553 rbh
SCNpilot_expt_1000_bf_scaffold_632_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16561..18924)
DNA (2364bp) protein (788aa)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YU61_9RHIZ rbh
Carbon-monoxide dehydrogenase, large subunit {ECO:0000313|EMBL:KFC67625.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase rbh
SCNpilot_expt_1000_bf_scaffold_632_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19019..19519)
DNA (501bp) protein (167aa)
2Fe-2S iron-sulfur cluster binding domain-containing protein; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YU62_9RHIZ
Carbon-monoxide dehydrogenase small subunit {ECO:0000313|EMBL:KFC67626.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_632_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19858..21189
DNA (1332bp) protein (444aa)
Putative methyl-accepting chemotaxis protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YQS9_9SPHN
Putative bacterial chemotaxis sensory transducer {ECO:0000313|EMBL:KFC67627.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_632_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21247..21699)
DNA (453bp) protein (151aa)
Putative Carbon monoxide dehydrogenase, coxG accessory protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TMW6_9BRAD
Carbon monoxide dehydrogenase subunit G {ECO:0000313|EMBL:KFC67628.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K09386 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_632_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21899..23095
DNA (1197bp) protein (399aa)
UPI0003D063D8 related cluster n=1 Tax=unknown RepID=UPI0003D063D8
Uncharacterized protein {ECO:0000313|EMBL:KFC67630.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K09123 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_632_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23086..23520
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HP60_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC67631.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K09128 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_632_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23568..24134)
DNA (567bp) protein (189aa)
4-hydroxyphenylacetate 3-monooxygenase reductase subunit; K09024 flavin reductase [EC:1.5.1.-]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000318D348
Flavin reductase-like, FMN-binding protein {ECO:0000313|EMBL:KFC67634.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_632_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24605..25588
DNA (984bp) protein (328aa)
branched-chain amino acid transporter permease subunit LivH n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000315737A rbh
Branched-chain amino acid ABC-type transport system permease component {ECO:0000313|EMBL:KFC67640.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_632_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25593..26990
DNA (1398bp) protein (466aa)
Branched-chain amino acid transport system permease protein LivM n=1 Tax=Rhodovulum sp. PH10 RepID=J6J047_9RHOB rbh
Branched-chain amino acid transport system permease {ECO:0000313|EMBL:KFC67641.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
SCNpilot_expt_1000_bf_scaffold_632_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26990..27844
DNA (855bp) protein (285aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNW4_9RHIZ rbh
ABC transporter related protein {ECO:0000313|EMBL:KFC67642.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_632_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27847..28572
DNA (726bp) protein (242aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNW5_9RHIZ rbh
Branched-chain amino acid transport system ATP-binding protein {ECO:0000313|EMBL:KFC67643.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein rbh
Displaying items 1-30 of 93 in total

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