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SCNpilot_expt_1000_bf_scaffold_2307

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2307_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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581..2581
DNA (2001bp) protein (667aa)
Peptidase M23 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IRV2_METNO rbh
Peptidase M23 {ECO:0000313|EMBL:KFC62942.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
peptidase M23 rbh
SCNpilot_expt_1000_bf_scaffold_2307_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2694..3611
DNA (918bp) protein (306aa)
Putative permease n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTH7_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC62941.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
auxin efflux carrier; K07088 rbh
SCNpilot_expt_1000_bf_scaffold_2307_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3617..4513)
DNA (897bp) protein (299aa)
glutamyl-tRNA synthetase; K01894 glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] rbh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030D94E6 rbh
Glutamyl-tRNA synthetase, class Ic {ECO:0000313|EMBL:KFC62940.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_2307_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4653..5255
DNA (603bp) protein (201aa)
HhH-GPD family protein; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
HhH-GPD family protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UDT4_METS4
HhH-GPD {ECO:0000313|EMBL:KFC62939.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_2307_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5310..6089)
DNA (780bp) protein (260aa)
HpcH/HpaI aldolase; K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-]
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTH4_9RHIZ
HpcH/HpaI aldolase {ECO:0000313|EMBL:KFC62938.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_2307_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6222..6545)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031452FC
Uncharacterized protein {ECO:0000313|EMBL:KFC62937.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2307_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6889..7653
DNA (765bp) protein (255aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] rbh
phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E79DCB rbh
SCNpilot_expt_1000_bf_scaffold_2307_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7695..8282
DNA (588bp) protein (196aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC62935.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_2307_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8366..8608
DNA (243bp) protein (81aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formylglycinamide ribonucleotide amidotransferase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; Phosphoribosylformylglycinamidine synthase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC
purS; phosphoribosylformylglycinamidine synthase subunit PurS; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
Phosphoribosylformylglycinamidine synthase, purS protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTH1_9RHIZ
SCNpilot_expt_1000_bf_scaffold_2307_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8613..9305
DNA (693bp) protein (231aa)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064588};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; Glutaminase PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; TaxID=1502851 species
phosphoribosylformylglycinamidine synthase I (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] rbh
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTH0_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_2307_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9313..9939)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030584AF
Periplasmic protein thiol {ECO:0000313|EMBL:KFC62932.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
protein thiol/disulfide oxidoreductase DsbE; K02199 cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
SCNpilot_expt_1000_bf_scaffold_2307_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9936..10124)
DNA (189bp) protein (63aa)
Heme exporter protein CcmD {ECO:0000313|EMBL:KFC62931.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_2307_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10121..10885)
DNA (765bp) protein (255aa)
Heme exporter protein CcmC n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYW1_9RHIZ
Cytochrome c-type biogenesis protein CcmC {ECO:0000313|EMBL:KFC62930.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
heme exporter protein CcmC; K02195 heme exporter protein C
SCNpilot_expt_1000_bf_scaffold_2307_14
unknown

Not on your lists

comp(11003..11110)
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2307_15
unknown

Not on your lists

11312..11539
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2307_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11549..12847)
DNA (1299bp) protein (433aa)
Heme exporter protein B n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYW7_9RHIZ rbh
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
heme exporter protein CcmB; K02194 heme exporter protein B rbh
SCNpilot_expt_1000_bf_scaffold_2307_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13053..13337
DNA (285bp) protein (95aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
acnA; aconitate hydratase (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3]
aconitate hydratase n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000367E924
Displaying 17 items

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