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SCNpilot_expt_1000_bf_scaffold_277

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_277_1
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

82..1170
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B6532D rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS29616.1}; TaxID=465515 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC; 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230) (Micrococcus; lysodeikticus).;"
SCNpilot_expt_1000_bf_scaffold_277_2
Arthrobacter sp. J3-49, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1228..2094)
DNA (867bp) protein (289aa)
Valyl-tRNA synthetase {ECO:0000313|EMBL:AFK89532.1}; EC=6.1.1.9 {ECO:0000313|EMBL:AFK89532.1};; TaxID=1179810 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. J3-49.;"
Valyl-tRNA synthetase n=1 Tax=Arthrobacter sp. J3-49 RepID=I3W1Q5_9MICC rbh
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_277_3
Arthrobacter sp. J3-49, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2091..3020)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. J3-49 RepID=I3W1Q6_9MICC rbh
Uncharacterized protein {ECO:0000313|EMBL:AFK89533.1}; TaxID=1179810 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. J3-49.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_277_4
Arthrobacter sp. J3-49, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3029..3853)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. J3-49 RepID=I3W1Q7_9MICC rbh
Uncharacterized protein {ECO:0000313|EMBL:AFK89534.1}; TaxID=1179810 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. J3-49.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_277_5
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4735..6279
DNA (1545bp) protein (515aa)
Integrase catalytic region n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8EA11_9MICO
Integrase core domain protein {ECO:0000313|EMBL:KJL37372.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
istA; transposase of ISAar33, IS21 family, IstA rbh
SCNpilot_expt_1000_bf_scaffold_277_6
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6511..6996
DNA (486bp) protein (162aa)
IstB domain protein ATP-binding protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8EA10_9MICO
IstB domain protein ATP-binding protein {ECO:0000313|EMBL:EIC06234.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
DNA replication protein
SCNpilot_expt_1000_bf_scaffold_277_7
Gordonia paraffinivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7539..8414)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI00035D57A4 rbh
Putative transposase {ECO:0000313|EMBL:GAC86328.1}; TaxID=1223543 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia paraffinivorans NBRC 108238.;"
transposase subunit
SCNpilot_expt_1000_bf_scaffold_277_8
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8411..8716)
DNA (306bp) protein (102aa)
Transposase n=1 Tax=Leifsonia xyli subsp. xyli (strain CTCB07) RepID=Q6AGW6_LEIXX
transposase
Transposase {ECO:0000313|EMBL:AAT88379.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
SCNpilot_expt_1000_bf_scaffold_277_9
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8962..9696)
DNA (735bp) protein (245aa)
Putative oxidoreductase n=1 Tax=Rhodococcus erythropolis (strain PR4 / NBRC 100887) RepID=C0ZQ79_RHOE4 rbh
oxidoreductase rbh
Putative oxidoreductase {ECO:0000313|EMBL:BAH31557.1}; TaxID=234621 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis (strain PR4 / NBRC 100887).;"
SCNpilot_expt_1000_bf_scaffold_277_10
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9693..10565)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Kocuria sp. UCD-OTCP RepID=UPI00036732D9 rbh
Transcriptional regulator, XRE family {ECO:0000313|EMBL:CDK01311.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
XRE family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_277_11
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10700..11581
DNA (882bp) protein (294aa)
Uncharacterized oxidoreductase MSMEG_2408/MSMEI_2347 {ECO:0000313|EMBL:CDK01310.1}; EC=1.-.-.- {ECO:0000313|EMBL:CDK01310.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Aldo/keto reductase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BF8_MESSB
aldo/keto reductase
SCNpilot_expt_1000_bf_scaffold_277_12
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11644..12723
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Rhodococcus opacus RepID=UPI00029CC1D5
Uncharacterized protein {ECO:0000313|EMBL:CDK01309.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_277_13
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12734..13726)
DNA (993bp) protein (331aa)
ArsR family transcriptional regulator n=1 Tax=Microbacterium barkeri RepID=UPI0002EB461B rbh
ArsR family transcriptional regulator {ECO:0000313|EMBL:KDA07036.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
arsR, arsC; putative transcriptional regulator/arsenate reductase
SCNpilot_expt_1000_bf_scaffold_277_14
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13723..14835)
DNA (1113bp) protein (371aa)
arsenic transporter n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034D03E2 rbh
Arsenic transporter {ECO:0000313|EMBL:KDA07037.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
arsB; arsenite export protein; K03325 arsenite transporter, ACR3 family
SCNpilot_expt_1000_bf_scaffold_277_15
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14832..15158)
DNA (327bp) protein (109aa)
Thioredoxin n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KEW1_9MICO
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
trxA; thioredoxin; K03671 thioredoxin 1
SCNpilot_expt_1000_bf_scaffold_277_16
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15155..16132)
DNA (978bp) protein (326aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
trxB; thioredoxin reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K4C4_9MICO rbh
SCNpilot_expt_1000_bf_scaffold_277_17
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16260..16661
DNA (402bp) protein (134aa)
Arsenate reductase n=1 Tax=Microbacterium sp. A33 RepID=B7FB01_9MICO
Protein tyrosine phosphatase {ECO:0000313|EMBL:KDA07040.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
low molecular weight protein tyrosine phosphatase
SCNpilot_expt_1000_bf_scaffold_277_18
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16716..17018)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C60D8
Flavoprotein {ECO:0000313|EMBL:KDA07041.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
putative oxidoreductase
SCNpilot_expt_1000_bf_scaffold_277_19
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(17093..17929)
DNA (837bp) protein (279aa)
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27); K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] rbh
UDP pyrophosphate phosphatase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B3EBD0
Tax=BJP_08E140C01_Actinomycetales_70_11
SCNpilot_expt_1000_bf_scaffold_277_20
Streptomyces sp. F8, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17934..19154)
DNA (1221bp) protein (407aa)
UPI0003D86D96 related cluster n=1 Tax=unknown RepID=UPI0003D86D96 rbh
Major facilitator superfamily {ECO:0000313|EMBL:AHE39759.1}; TaxID=1436085 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. F8.;"
major facilitator transporter rbh
SCNpilot_expt_1000_bf_scaffold_277_21
Arthrobacter sp. AK-YN10, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19151..19885)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. AK-YN10 RepID=U1Y9J1_9MICC
Uncharacterized protein {ECO:0000313|EMBL:ERI38059.1}; TaxID=1349820 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. AK-YN10.;"
SCNpilot_expt_1000_bf_scaffold_277_22
Rhodococcus qingshengii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19882..20445)
DNA (564bp) protein (188aa)
fructose-2,6-bisphosphatase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
Fructose-2,6-bisphosphatase n=1 Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RTP5_MYCRN
Uncharacterized protein {ECO:0000313|EMBL:KDQ00777.1}; TaxID=334542 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus qingshengii.;"
SCNpilot_expt_1000_bf_scaffold_277_23
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20494..20871)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI00035CF43D
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_277_24
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20868..21371)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI0003660D99
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
camphor resistance protein CrcB; K06199 CrcB protein
SCNpilot_expt_1000_bf_scaffold_277_25
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21368..22654)
DNA (1287bp) protein (429aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=596312 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus SK58.;"
enolase 2 (EC:4.2.1.11) rbh
Enolase n=1 Tax=Micrococcus luteus SK58 RepID=D3LL73_MICLU rbh
SCNpilot_expt_1000_bf_scaffold_277_26
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(22656..23384)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00037D2848
gpmA; phosphoglycerate mutase
Tax=BJP_IG2157_Actinomycetales_63_19
SCNpilot_expt_1000_bf_scaffold_277_27
Brachybacterium phenoliresistens, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23387..23896)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036DAB0B
Uncharacterized protein {ECO:0000313|EMBL:EWS82779.1}; TaxID=396014 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium phenoliresistens.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_277_28
unknown

Not on your lists

comp(23911..24324)
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_277_29
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25006..25416)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Nocardiopsis alba (strain ATCC BAA-2165 / BE74) RepID=J7L6S9_NOCAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR06152.1}; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;"
SCNpilot_expt_1000_bf_scaffold_277_30
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(25722..27224)
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI000380DB57
putative DNA mismatch repair protein
Putative DNA mismatch repair protein {ECO:0000313|EMBL:BAI62551.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
Displaying items 1-30 of 100 in total

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