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SCNpilot_expt_1000_bf_scaffold_339

Search features with annotation key words

Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_339_1
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..584)
DNA (582bp) protein (194aa)
ribA; 3,4-dihydroxy-2-butanone 4-phosphate synthase; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
GTP cyclohydrolase-2 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1C4_9MICO
Riboflavin biosynthesis protein RibBA {ECO:0000256|SAAS:SAAS00280052}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
SCNpilot_expt_1000_bf_scaffold_339_2
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(581..1270)
DNA (690bp) protein (230aa)
riboflavin synthase alpha chain; K00793 riboflavin synthase [EC:2.5.1.9]
riboflavin synthase subunit alpha n=1 Tax=Microbacterium sp. 292MF RepID=UPI000372688B
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:KHK99513.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
SCNpilot_expt_1000_bf_scaffold_339_3
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1272..2339)
DNA (1068bp) protein (356aa)
ribD; pyrimidine reductase, riboflavin biosynthesis; K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Riboflavin biosynthesis protein RibD n=1 Tax=Microbacterium sp. TS-1 RepID=U2YRM4_9MICO rbh
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_expt_1000_bf_scaffold_339_4
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2700..4514
DNA (1815bp) protein (605aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000377049D rbh
Glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:EZP26104.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
glycerol-3-phosphate dehydrogenase
SCNpilot_expt_1000_bf_scaffold_339_5
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4573..6108
DNA (1536bp) protein (512aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
glpK; glycerol kinase; K00864 glycerol kinase [EC:2.7.1.30]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000366DA55
SCNpilot_expt_1000_bf_scaffold_339_6
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6247..7110)
DNA (864bp) protein (288aa)
mutM2; formamidopyrimidine-DNA glycosylase; K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
DNA lyase n=1 Tax=Microbacterium RepID=UPI000380B25A rbh
DNA glycosylase/AP lyase, H2TH DNA-binding protein {ECO:0000313|EMBL:EIC08947.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_1000_bf_scaffold_339_7
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7144..7704)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002EF23ED
Acetyltransferase {ECO:0000313|EMBL:KIC58459.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
acetyltransferase
SCNpilot_expt_1000_bf_scaffold_339_8
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8014..8814
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000376B91E rbh
Uncharacterized protein {ECO:0000313|EMBL:CDJ98884.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_339_9
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8946..9923)
DNA (978bp) protein (326aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
trpS; tryptophanyl-tRNA synthetase; K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2]
Tryptophan--tRNA ligase n=2 Tax=Microbacterium RepID=H8E1D0_9MICO rbh
SCNpilot_expt_1000_bf_scaffold_339_10
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10000..10845)
DNA (846bp) protein (282aa)
exonuclease III; K01142 exodeoxyribonuclease III [EC:3.1.11.2]
Exodeoxyribonuclease III Xth n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1D4_9MICO rbh
Exodeoxyribonuclease III {ECO:0000313|EMBL:KIC59612.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
SCNpilot_expt_1000_bf_scaffold_339_11
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(10881..12107)
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000362130C rbh
hypothetical protein; K07058 membrane protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_339_12
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12238..12993)
DNA (756bp) protein (252aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
sdhB; succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1]
succinate dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000380B16C
SCNpilot_expt_1000_bf_scaffold_339_13
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12993..14819)
DNA (1827bp) protein (609aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
sdhA; succinate dehydrogenase/fumarate reductase, flavoprotein subunit; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1]
Succinate dehydrogenase, flavoprotein subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1D7_9MICO rbh
SCNpilot_expt_1000_bf_scaffold_339_14
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14866..15312)
DNA (447bp) protein (149aa)
Succinate dehydrogenase, hydrophobic anchorsubunit n=1 Tax=Microbacterium sp. TS-1 RepID=U2YRL1_9MICO
Succinate dehydrogenase, hydrophobic anchorsubunit {ECO:0000313|EMBL:GAD35669.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
sdhD; succinate dehydrogenase, hydrophobic anchor subunit; K00242 succinate dehydrogenase membrane anchor subunit
SCNpilot_expt_1000_bf_scaffold_339_15
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15312..15656)
DNA (345bp) protein (115aa)
succinate dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034513C3
succinate dehydrogenase/fumarate reductase, cytochrome b subunit; K00241 succinate dehydrogenase cytochrome b556 subunit
Succinate dehydrogenase/fumarate reductase, cytochrome b subunit {ECO:0000313|EMBL:BAJ73588.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_1000_bf_scaffold_339_16
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15917..17056
DNA (1140bp) protein (380aa)
manC; mannose-1-phosphate guanylyltransferase; K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BDS8_9MICO rbh
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:EPD86774.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
SCNpilot_expt_1000_bf_scaffold_339_17
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17206..18321
DNA (1116bp) protein (372aa)
membrane protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B74ED3
Membrane protein {ECO:0000313|EMBL:KEP76116.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
ABC transporter periplasmic protein; K07335 basic membrane protein A and related proteins
SCNpilot_expt_1000_bf_scaffold_339_18
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18420..19937
DNA (1518bp) protein (506aa)
ABC transporter ATPase; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
ABC transporter n=1 Tax=Agromyces italicus RepID=UPI0003B64955
Heme ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEP76115.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
SCNpilot_expt_1000_bf_scaffold_339_19
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19934..21202
DNA (1269bp) protein (423aa)
ABC transporter permease n=1 Tax=Agromyces italicus RepID=UPI0003B6B43A
ABC transporter permease; K02057 simple sugar transport system permease protein
ABC-type uncharacterized transport system, permease component {ECO:0000313|EMBL:BAJ73584.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_1000_bf_scaffold_339_20
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21199..22479
DNA (1281bp) protein (427aa)
ABC transporter permease n=1 Tax=Agromyces subbeticus RepID=UPI0003B75D1C
ABC transporter permease {ECO:0000313|EMBL:KGJ73273.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
ABC transporter permease; K02057 simple sugar transport system permease protein
SCNpilot_expt_1000_bf_scaffold_339_21
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22476..22880
DNA (405bp) protein (135aa)
cytidine deaminase; K01489 cytidine deaminase [EC:3.5.4.5]
Cytidine deaminase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XS37_9MICO
Cytidine deaminase {ECO:0000313|EMBL:GAD35662.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
SCNpilot_expt_1000_bf_scaffold_339_22
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22877..24226
DNA (1350bp) protein (450aa)
deoA; thymidine phosphorylase; K00758 thymidine phosphorylase [EC:2.4.2.4]
pyrimidine-nucleoside phosphorylase n=1 Tax=Microbacterium sp. 11MF RepID=UPI00035DB652 rbh
Thymidine phosphorylase {ECO:0000313|EMBL:EZP26085.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
SCNpilot_expt_1000_bf_scaffold_339_23
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24334..25449
DNA (1116bp) protein (372aa)
add; adenosine deaminase; K01488 adenosine deaminase [EC:3.5.4.4]
Adenosine deaminase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1E7_9MICO rbh
Adenosine deaminase {ECO:0000313|EMBL:EIC08967.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_1000_bf_scaffold_339_24
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25612..26766)
DNA (1155bp) protein (385aa)
Mannitol-1-phosphate 5-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015323}; EC=1.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015317};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
mtlD; mannitol-1-phosphate/altronate dehydrogenase; K00009 mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
Mannitol-1-phosphate 5-dehydrogenase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AIZ0_9MICO rbh
SCNpilot_expt_1000_bf_scaffold_339_25
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26777..27214)
DNA (438bp) protein (146aa)
mtlD; mannitol/fructose-specific phosphotransferase system, IIA domain; K02798 PTS system, mannitol-specific IIA component [EC:2.7.1.69]
Mannitol/fructose-specific phosphotransferasesystem, IIA domain n=1 Tax=Microbacterium sp. TS-1 RepID=U2XCG6_9MICO
Mannitol/fructose-specific phosphotransferasesystem, IIA domain {ECO:0000313|EMBL:GAD35656.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
SCNpilot_expt_1000_bf_scaffold_339_26
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27353..29017)
DNA (1665bp) protein (555aa)
phosphotransferase system, mannitol-specific IIBC component; K02798 PTS system, mannitol-specific IIA component [EC:2.7.1.69]; K02799 PTS system, mannitol-specific IIB component [EC:2.7.1.69]; K02800 PTS system, mannitol-specific IIC component rbh
Phosphotransferase system lactose/cellobiose-specific IIB subunit n=2 Tax=Microbacterium RepID=H8E1F1_9MICO rbh
Phosphotransferase system lactose/cellobiose-specific IIB subunit {ECO:0000313|EMBL:EIC08971.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_1000_bf_scaffold_339_27
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29048..30709)
DNA (1662bp) protein (554aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
ptsI; phosphoenolpyruvate-protein kinase; K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9]
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1F2_9MICO rbh
SCNpilot_expt_1000_bf_scaffold_339_28
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30758..31033)
DNA (276bp) protein (92aa)
Phosphocarrier, HPr family n=2 Tax=Microbacterium RepID=H8E1F3_9MICO
Phosphotransferase {ECO:0000313|EMBL:KIC59596.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
phosphotransferase system, HPr-related protein; K11189 phosphocarrier protein
SCNpilot_expt_1000_bf_scaffold_339_29
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31030..31389)
DNA (360bp) protein (120aa)
phosphotransferase system cellobiose-specific component IIB; K02760 PTS system, cellobiose-specific IIB component [EC:2.7.1.69]
Phosphotransferase system lactose/cellobiose-specific IIB subunit n=2 Tax=Microbacterium RepID=H8E1F4_9MICO
PTS sugar transporter {ECO:0000313|EMBL:KIC59595.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
SCNpilot_expt_1000_bf_scaffold_339_30
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31555..33459
DNA (1905bp) protein (635aa)
PRD domain protein n=2 Tax=Microbacterium RepID=H8E1F5_9MICO rbh
Transcriptional antiterminator {ECO:0000313|EMBL:KIC59594.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transcriptional antiterminator; K03491 lichenan operon transcriptional antiterminator
Displaying items 1-30 of 110 in total

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