name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_576_1
unknown
|
Not on your lists |
1..72
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_576_2
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(86..334)
|
Transcriptional regulator WhiB n=1 Tax=Microbacterium sp. TS-1 RepID=U2YYM3_9MICO
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
regulatory protein
|
|
SCNpilot_expt_1000_bf_scaffold_576_3
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
595..993
|
Signal transduction histidine kinase n=2 Tax=Microbacterium RepID=H8E1N2_9MICO
Histidine kinase {ECO:0000313|EMBL:EXJ52506.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
signal transduction histidine kinase
|
|
SCNpilot_expt_1000_bf_scaffold_576_4
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(1029..1496)
|
bcp; peroxiredoxin; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=2 Tax=Microbacterium RepID=H8E1N3_9MICO
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:EIC09053.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
|
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SCNpilot_expt_1000_bf_scaffold_576_5
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
1592..3292
|
acyl-CoA synthetase (EC:6.2.1.-)
rbh
Acetyl-coenzyme A synthetase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XK92_9MICO
rbh
Acetyl-coenzyme A synthetase {ECO:0000313|EMBL:GAD33585.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
|
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SCNpilot_expt_1000_bf_scaffold_576_6
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(3328..4365)
|
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
GTPase; K06949 ribosome biogenesis GTPase [EC:3.6.1.-]
Putative ribosome biogenesis GTPase RsgA n=2 Tax=Microbacterium RepID=H8E1N4_9MICO
rbh
|
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SCNpilot_expt_1000_bf_scaffold_576_7
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(4378..5721)
|
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
5-enolpyruvylshikimate-3-phosphate synthase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
3-phosphoshikimate 1-carboxyvinyltransferase n=2 Tax=Microbacterium RepID=H8E1N5_9MICO
|
|
SCNpilot_expt_1000_bf_scaffold_576_8
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
5775..6452
|
RNA polymerase sigma-70 factor n=2 Tax=Microbacterium RepID=H8E1N6_9MICO
rbh
TIGR02947 family RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EPD86691.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
sigH; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; K03088 RNA polymerase sigma-70 factor, ECF subfamily
|
|
SCNpilot_expt_1000_bf_scaffold_576_9
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
6449..6694
|
Transmembrane transcriptional regulator n=2 Tax=Microbacterium RepID=H8E1N7_9MICO
Transmembrane transcriptional regulator {ECO:0000313|EMBL:EIC09057.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
transmembrane transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_576_10
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(6703..7602)
|
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003090561
rbh
Diacylglycerol kinase {ECO:0000313|EMBL:KIC58276.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
diacylglycerol kinase
|
|
SCNpilot_expt_1000_bf_scaffold_576_11
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(7685..11416)
|
Alpha-ketoglutarate decarboxylase {ECO:0000313|EMBL:KIC58279.1}; EC=4.1.1.71 {ECO:0000313|EMBL:KIC58279.1};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
kgd; 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component; K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AXE0_9MICO
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_576_12
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
11526..12983
|
Inosine 5'-monophosphate dehydrogenase {ECO:0000313|EMBL:EXJ52514.1}; EC=1.1.1.205 {ECO:0000313|EMBL:EXJ52514.1};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
guaB; IMP dehydrogenase/GMP reductase; K00088 IMP dehydrogenase [EC:1.1.1.205]
IMP dehydrogenase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEJ2_9MICO
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_576_13
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
13112..14428
|
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1P4_9MICO
rbh
Membrane protein {ECO:0000313|EMBL:EXJ52515.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hemolysins
|
|
SCNpilot_expt_1000_bf_scaffold_576_14
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
14425..15480
|
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E1P5_9MICO
rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD86682.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hemolysins
|
|
SCNpilot_expt_1000_bf_scaffold_576_15
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(15553..16626)
|
NADH:flavin oxidoreductase/NADH oxidase n=2 Tax=Microbacterium RepID=H8E1P6_9MICO
rbh
Oxidoreductase {ECO:0000313|EMBL:EXJ52517.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
NADH:flavin oxidoreductase, Old Yellow enzyme family
|
|
SCNpilot_expt_1000_bf_scaffold_576_16
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
16669..17598
|
ADP-dependent (S)-NAD(P)H-hydrate dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; EC=4.2.1.136 {ECO:0000256|HAMAP-Rule:MF_01965};; ADP-dependent NAD(P)HX dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00037C60E5
sugar kinase
|
|
SCNpilot_expt_1000_bf_scaffold_576_17
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(17628..18308)
|
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7ET26_9ACTO
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:ELP62568.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
oxidoreductase
|
|
SCNpilot_expt_1000_bf_scaffold_576_18
Streptomyces sp. PAMC26508, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
18420..18833
|
Transcriptional regulator, HxlR family n=2 Tax=Streptomyces RepID=E8WD55_STRFA
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGJ54752.1}; TaxID=1265601 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PAMC26508.;"
|
|
SCNpilot_expt_1000_bf_scaffold_576_19
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
18952..20178
|
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E1P8_9MICO
rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD86679.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_576_20
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
20235..20588
|
Uncharacterized conserved protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBK1_MICTS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEP74721.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
|
|
SCNpilot_expt_1000_bf_scaffold_576_21
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
20676..21818
|
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KCF1_9MICO
Inner membrane transport protein YdhP {ECO:0000313|EMBL:KJL18292.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
arabinose efflux permease; K08156 MFS transporter, DHA1 family, arabinose polymer transporter
|
|
SCNpilot_expt_1000_bf_scaffold_576_22
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(21843..23045)
|
Homoserine O-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.31 {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070942};; Homoserine O-trans-acetylase {ECO:0000256|HAMAP-Rule:MF_00296}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
metX; homoserine acetyltransferase; K00641 homoserine O-acetyltransferase [EC:2.3.1.31]
Homoserine O-acetyltransferase n=2 Tax=Microbacterium RepID=H8E1Q1_9MICO
|
|
SCNpilot_expt_1000_bf_scaffold_576_23
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(23224..24546)
|
Methionine gamma-lyase {ECO:0000313|EMBL:KJL31506.1}; EC=4.4.1.11 {ECO:0000313|EMBL:KJL31506.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
cysD; O-acetylhomoserine sulfhydrylase; K01740 O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
O-acetylhomoserine aminocarboxypropyltransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034A6E14
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_576_24
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
24683..25459
|
oxidoreductase n=1 Tax=Microbacterium paraoxydans RepID=UPI00035D5172
rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EZP25992.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
short-chain alcohol dehydrogenase of unknown specificity
|
|
SCNpilot_expt_1000_bf_scaffold_576_25
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(25572..26975)
|
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AC30_9MICO
rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD86673.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
permease of the major facilitator superfamily
|
|
SCNpilot_expt_1000_bf_scaffold_576_26
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
27062..27586
|
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AXB4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86672.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
phosphoribosyltransferase; K07101
|
|
SCNpilot_expt_1000_bf_scaffold_576_27
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
27586..28290
|
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
ung; uracil DNA glycosylase; K03648 uracil-DNA glycosylase [EC:3.2.2.27]
Uracil-DNA glycosylase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1Q6_9MICO
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_576_28
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
28315..28929
|
sortase; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183]
GCN5-related N-acetyltransferase n=2 Tax=Microbacterium RepID=H8E1Q7_9MICO
rbh
Phosphinothricin acetyltransferase {ECO:0000313|EMBL:KIC58292.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
|
|
SCNpilot_expt_1000_bf_scaffold_576_29
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(28934..29365)
|
TPR repeat, SEL1 subfamily n=2 Tax=Microbacterium RepID=H8E1Q8_9MICO
TPR repeat, SEL1 subfamily {ECO:0000313|EMBL:EIC09078.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
TPR repeat, SEL1 subfamily
|
|
SCNpilot_expt_1000_bf_scaffold_576_30
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(29349..30407)
|
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AC24_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86668.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
zinc metalloprotease
|