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SCNpilot_expt_1000_bf_scaffold_595

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Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_595_1
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..959)
DNA (957bp) protein (319aa)
ABC-type transporter, integral membrane subunit n=2 Tax=Microbacterium RepID=H8E6E1_9MICO rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:KIC59911.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
sugar ABC transporter permease; K10234 alpha-glucoside transport system permease protein
SCNpilot_expt_1000_bf_scaffold_595_2
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(956..2290)
DNA (1335bp) protein (445aa)
ABC transporter permease n=1 Tax=Microbacterium sp. B19 RepID=UPI000347BF5F
sugar ABC transporter permease; K10233 alpha-glucoside transport system permease protein
ABC-type sugar transport systems, permease components {ECO:0000313|EMBL:BAJ75451.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_1000_bf_scaffold_595_3
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2388..3716)
DNA (1329bp) protein (443aa)
Extracellular solute-binding protein family 1 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6E3_9MICO rbh
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIC59909.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
sugar ABC transporter periplasmic protein; K10232 alpha-glucoside transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_595_4
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3947..4963
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AE54_9MICO rbh
Transcriptional regulator {ECO:0000313|EMBL:KIC59908.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_595_5
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(5029..5418)
DNA (390bp) protein (130aa)
50S ribosomal protein L7/L12 n=1 Tax=Microbacterium yannicii RepID=UPI0002FF7C08
ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_1000_bf_scaffold_595_6
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(5461..5976)
DNA (516bp) protein (172aa)
50S ribosomal protein L10 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6T2_MICTS
rplJ; ribosomal protein L10; K02864 large subunit ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_1000_bf_scaffold_595_7
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6288..7280)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI00037DD64C rbh
Uncharacterized protein {ECO:0000313|EMBL:CDK00571.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_595_8
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7585..8268
DNA (684bp) protein (228aa)
YqaJ recombinase family protein n=2 Tax=Microbacterium RepID=H8E6E7_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD84947.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
membrane carboxypeptidase
SCNpilot_expt_1000_bf_scaffold_595_9
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8427..10163
DNA (1737bp) protein (579aa)
Drug:H+ antiporter-2 (14 Spanner) (DHA2) family drug resistance MFS transporter n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A8V7_9MICO rbh
Drug:H+ antiporter-2 (14 Spanner) (DHA2) family drug resistance MFS transporter {ECO:0000313|EMBL:EPD84946.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
permease of the major facilitator superfamily
SCNpilot_expt_1000_bf_scaffold_595_10
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10175..10672
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036992FF
MarR family protein {ECO:0000313|EMBL:KJL20688.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_595_11
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10824..11855
DNA (1032bp) protein (344aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6F0_9MICO
NADPH:quinone reductase {ECO:0000313|EMBL:EZP28012.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
NADPH:quinone reductase
SCNpilot_expt_1000_bf_scaffold_595_12
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11860..12741)
DNA (882bp) protein (294aa)
Transcriptional regulator, ArgP family n=2 Tax=Microbacterium RepID=H8E6F1_9MICO
LysR family transcriptional regulator {ECO:0000313|EMBL:EXJ50865.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
transcriptional regulator; K05596 LysR family transcriptional regulator, chromosome initiation inhibitor
SCNpilot_expt_1000_bf_scaffold_595_13
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12814..13473
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F3AF2C rbh
Amino acid transporter {ECO:0000313|EMBL:KEP74800.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
lysine efflux permease; K06895 L-lysine exporter family protein LysE/ArgO
SCNpilot_expt_1000_bf_scaffold_595_14
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13480..13818)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002EF5170
Uncharacterized protein {ECO:0000313|EMBL:GAB93136.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_595_15
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13864..14139
DNA (276bp) protein (92aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000370888D
Acylphosphatase {ECO:0000313|EMBL:GAD33677.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
SCNpilot_expt_1000_bf_scaffold_595_16
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14188..15225)
DNA (1038bp) protein (346aa)
dioxygenase; K00459 nitronate monooxygenase [EC:1.13.12.16]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036C5CFB
Dioxygenase {ECO:0000313|EMBL:BAJ75436.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_1000_bf_scaffold_595_17
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(15307..15996)
DNA (690bp) protein (230aa)
50S ribosomal protein L1 n=2 Tax=Microbacterium RepID=H8E458_9MICO rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
rplA; ribosomal protein L1; K02863 large subunit ribosomal protein L1
SCNpilot_expt_1000_bf_scaffold_595_18
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(16010..16441)
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Microbacterium RepID=UPI00037E4CD2
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
rplK; ribosomal protein L11; K02867 large subunit ribosomal protein L11
SCNpilot_expt_1000_bf_scaffold_595_19
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16560..17582)
DNA (1023bp) protein (341aa)
Transcription termination/antitermination protein NusG n=2 Tax=Microbacterium RepID=H8E456_9MICO rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
nusG; transcription antiterminator; K02601 transcriptional antiterminator NusG
SCNpilot_expt_1000_bf_scaffold_595_20
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17617..17880)
DNA (264bp) protein (88aa)
Protein translocase subunit SecE n=2 Tax=Microbacterium RepID=H8E455_9MICO
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE
SCNpilot_expt_1000_bf_scaffold_595_21
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18149..18586)
DNA (438bp) protein (146aa)
Pyridoxamine 5-phosphate oxidase-related FMN-binding protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E454_9MICO
Pyridoxamine 5-phosphate oxidase-related FMN-binding protein {ECO:0000313|EMBL:EIC08541.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_595_22
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18655..20022)
DNA (1368bp) protein (456aa)
NAD-dependent aldehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Aldehyde Dehydrogenase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E451_9MICO rbh
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EIC08538.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_1000_bf_scaffold_595_23
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20046..21503)
DNA (1458bp) protein (486aa)
gabD; succinate-semialdehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Aldehyde Dehydrogenase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E450_9MICO rbh
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EIC08537.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_1000_bf_scaffold_595_24
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21500..23065)
DNA (1566bp) protein (522aa)
Putative amino acid transporter n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK21_MICPN rbh
Large neutral amino acids transporter small subunit 2 {ECO:0000313|EMBL:KDA07101.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
putative amino acid transporter rbh
SCNpilot_expt_1000_bf_scaffold_595_25
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23062..23949)
DNA (888bp) protein (296aa)
UspA domain-containing protein n=2 Tax=Microbacterium RepID=H8E448_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD84928.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
universal stress protein UspA
SCNpilot_expt_1000_bf_scaffold_595_26
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23946..25322)
DNA (1377bp) protein (459aa)
Putrescine oxidase {ECO:0000313|EMBL:KJL23280.1}; EC=1.4.3.10 {ECO:0000313|EMBL:KJL23280.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
monoamine oxidase; K03343 putrescine oxidase [EC:1.4.3.10]
Putrescine oxidase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AS25_9MICO
SCNpilot_expt_1000_bf_scaffold_595_27
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25362..26741)
DNA (1380bp) protein (460aa)
gabT; 4-aminobutyrate aminotransferase; K07250 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22]
4-aminobutyrate transaminase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A8T5_9MICO rbh
4-aminobutyrate transaminase {ECO:0000313|EMBL:EPD84926.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
SCNpilot_expt_1000_bf_scaffold_595_28
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26812..28353
DNA (1542bp) protein (514aa)
Purine catabolism PurC domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E445_9MICO rbh
Polyketide synthase regulator {ECO:0000313|EMBL:KIC59890.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
regulator of polyketide synthase expression; K09684 purine catabolism regulatory protein
SCNpilot_expt_1000_bf_scaffold_595_29
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28446..29123
DNA (678bp) protein (226aa)
Response regulator receiver n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E444_9MICO
Response regulator receiver {ECO:0000313|EMBL:EIC08531.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
SCNpilot_expt_1000_bf_scaffold_595_30
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29120..30085
DNA (966bp) protein (322aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A716_9MICO rbh
signal transduction histidine kinase
Displaying items 1-30 of 63 in total

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