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SCNpilot_expt_1000_bf_scaffold_620

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_620_1
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..497)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8EA00_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL37394.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_620_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

768..1064
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E970_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL37395.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_expt_1000_bf_scaffold_620_3
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1124..1894)
DNA (771bp) protein (257aa)
hypothetical protein; K03424 TatD DNase family protein [EC:3.1.21.-]
Uncharacterized protein n=1 Tax=Gordonia soli NBRC 108243 RepID=M0QQB4_9ACTO
Deoxyribonuclease {ECO:0000313|EMBL:KDO99022.1}; TaxID=1402966 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium avium subsp. hominissuis 100.;"
SCNpilot_expt_1000_bf_scaffold_620_4
Propionibacterium sp. oral taxon 192, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1891..3180)
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B785AB rbh
Uncharacterized protein {ECO:0000313|EMBL:EPH06984.1}; TaxID=1203605 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. oral taxon 192 str. F0372.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_620_5
Gordonia soli, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3177..3944)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Gordonia soli NBRC 108243 RepID=M0QPE9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAC70428.1}; TaxID=1223545 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia soli NBRC 108243.;"
SCNpilot_expt_1000_bf_scaffold_620_6
Propionibacterium sp. oral taxon 192, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3944..5701)
DNA (1758bp) protein (586aa)
Uncharacterized protein n=1 Tax=Propionibacterium sp. oral taxon 192 str. F0372 RepID=S3XA40_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPH06986.1}; TaxID=1203605 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. oral taxon 192 str. F0372.;"
P-loop ATPase
SCNpilot_expt_1000_bf_scaffold_620_7
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5930..8503)
DNA (2574bp) protein (858aa)
dnaB; putative replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] rbh
DNA helicase n=1 Tax=Cellulomonas sp. JC225 RepID=UPI000311E7ED rbh
DNA helicase {ECO:0000313|EMBL:KGM11301.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
SCNpilot_expt_1000_bf_scaffold_620_8
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(8919..9371)
DNA (453bp) protein (151aa)
50S ribosomal protein L9 n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BB98_9MICO
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
rplI; ribosomal protein L9; K02939 large subunit ribosomal protein L9
SCNpilot_expt_1000_bf_scaffold_620_9
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(9384..9638)
DNA (255bp) protein (85aa)
30S ribosomal protein S18 n=2 Tax=Microbacterium RepID=H8E980_9MICO
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
rpsR; ribosomal protein S18; K02963 small subunit ribosomal protein S18
SCNpilot_expt_1000_bf_scaffold_620_10
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9704..10039)
DNA (336bp) protein (112aa)
Single-stranded DNA-binding protein n=2 Tax=Microbacterium RepID=H8E981_9MICO
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
ssb; single-stranded DNA-binding protein; K03111 single-strand DNA-binding protein
SCNpilot_expt_1000_bf_scaffold_620_11
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(10195..10560)
DNA (366bp) protein (122aa)
30S ribosomal protein S6 n=2 Tax=Microbacterium RepID=H8E982_9MICO
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
rpsF; ribosomal protein S6; K02990 small subunit ribosomal protein S6
SCNpilot_expt_1000_bf_scaffold_620_12
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10687..11931
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BB94_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD85884.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_620_13
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11953..13611)
DNA (1659bp) protein (553aa)
ABC transporter related protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E985_9MICO rbh
ABC transporter related protein {ECO:0000313|EMBL:EIC06479.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
putative oligopeptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_620_14
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13611..14606)
DNA (996bp) protein (332aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E986_9MICO rbh
Peptide ABC transporter permease {ECO:0000313|EMBL:EXJ51421.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ABC transporter permease
SCNpilot_expt_1000_bf_scaffold_620_15
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14608..15687)
DNA (1080bp) protein (360aa)
ABC-type transporter, integral membrane subunit n=2 Tax=Microbacterium RepID=H8E987_9MICO rbh
Peptide ABC transporter permease {ECO:0000313|EMBL:EXJ51420.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
dppB; ABC transporter permease
SCNpilot_expt_1000_bf_scaffold_620_16
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15778..17409)
DNA (1632bp) protein (544aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000379D067 rbh
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIC57942.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
extracellular solute-binding protein family 5
SCNpilot_expt_1000_bf_scaffold_620_17
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17542..17940)
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E994_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL29949.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein; K09959 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_620_18
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18060..19607)
DNA (1548bp) protein (516aa)
NAD-dependent aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
Aldehyde Dehydrogenase n=2 Tax=Microbacterium RepID=H8E995_9MICO rbh
EPTC-inducible aldehyde dehydrogenase {ECO:0000313|EMBL:EPD85873.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
SCNpilot_expt_1000_bf_scaffold_620_19
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19710..21893)
DNA (2184bp) protein (728aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
4-alpha-glucanotransferase (EC:2.4.1.25); K00705 4-alpha-glucanotransferase [EC:2.4.1.25]
4-alpha-glucanotransferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E998_9MICO rbh
SCNpilot_expt_1000_bf_scaffold_620_20
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21977..23320)
DNA (1344bp) protein (448aa)
GAF domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E999_9MICO rbh
GAF domain protein {ECO:0000313|EMBL:EIC06493.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
transcriptional activator of acetoin/glycerol metabolism
SCNpilot_expt_1000_bf_scaffold_620_21
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23464..24906)
DNA (1443bp) protein (481aa)
pcnB; tRNA nucleotidyltransferase/poly(A) polymerase; K00970 poly(A) polymerase [EC:2.7.7.19]
CCA tRNA nucleotidyltransferase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A9M5_9MICO rbh
CCA tRNA nucleotidyltransferase {ECO:0000313|EMBL:EPD85868.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
SCNpilot_expt_1000_bf_scaffold_620_22
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24985..26637)
DNA (1653bp) protein (551aa)
Methyltransferase small n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9A1_9MICO rbh
SAM-dependent methyltransferase {ECO:0000313|EMBL:KIC57954.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
methylase of polypeptide chain release factors
SCNpilot_expt_1000_bf_scaffold_620_23
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26767..28938
DNA (2172bp) protein (724aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABU5_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD85866.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component
SCNpilot_expt_1000_bf_scaffold_620_24
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28931..30532
DNA (1602bp) protein (534aa)
Integral membrane protein MviN n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AGH2_9MICO
Integral membrane protein MviN {ECO:0000313|EMBL:EIC06497.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein, virulence factor; K03980 virulence factor
SCNpilot_expt_1000_bf_scaffold_620_25
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30585..31613
DNA (1029bp) protein (343aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
trxB; thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BB79_9MICO rbh
SCNpilot_expt_1000_bf_scaffold_620_26
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31739..32062
DNA (324bp) protein (108aa)
Thioredoxin n=2 Tax=Microbacterium RepID=H8E9A5_9MICO
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
trxA; thiol-disulfide isomerase and thioredoxins; K03671 thioredoxin 1
SCNpilot_expt_1000_bf_scaffold_620_27
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32090..32431)
DNA (342bp) protein (114aa)
Tryptophan synthase alpha chain n=2 Tax=Microbacterium RepID=H8E9A6_9MICO
Tryptophan synthase subunit alpha {ECO:0000313|EMBL:KIC57959.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
tryptophan synthase alpha chain
SCNpilot_expt_1000_bf_scaffold_620_28
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32460..33500)
DNA (1041bp) protein (347aa)
ParB family chromosome partitioning protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABT9_9MICO rbh
Chromosome partitioning protein ParB {ECO:0000313|EMBL:KIC57960.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
parB; transcriptional regulator; K03497 chromosome partitioning protein, ParB family
SCNpilot_expt_1000_bf_scaffold_620_29
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33500..34432)
DNA (933bp) protein (311aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9A8_9MICO rbh
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:EIC06502.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
parA; ATPase; K03496 chromosome partitioning protein
SCNpilot_expt_1000_bf_scaffold_620_30
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34947..35267)
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Gordonia effusa NBRC 100432 RepID=H0QUS4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KFF58607.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
Excinuclease ABC C subunit domain protein
Displaying items 1-30 of 43 in total

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