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SCNpilot_expt_1000_bf_scaffold_1253

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1253_1
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..317)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BCK7_9MICO
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:EXJ51823.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Na+ ABC transporter ATPase
SCNpilot_expt_1000_bf_scaffold_1253_2
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(371..1414)
DNA (1044bp) protein (348aa)
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:KJL22561.1}; EC=3.1.4.46 {ECO:0000313|EMBL:KJL22561.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003091D9D rbh
SCNpilot_expt_1000_bf_scaffold_1253_3
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1625..2533
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XS01_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD35780.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1253_4
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2846..4426)
DNA (1581bp) protein (527aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
guaA; GMP synthase, PP-ATPase domain/subunit; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4Q3_9MICO
SCNpilot_expt_1000_bf_scaffold_1253_5
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4423..4911)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003812B91
Uncharacterized protein {ECO:0000313|EMBL:KIC59413.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1253_6
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4922..5836)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BCL1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC59412.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1253_7
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5836..6954)
DNA (1119bp) protein (373aa)
Inosine-5-monophosphate dehydrogenase {ECO:0000313|EMBL:KIC59432.1}; EC=1.1.1.205 {ECO:0000313|EMBL:KIC59432.1};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
IMP dehydrogenase/GMP reductase; K00088 IMP dehydrogenase [EC:1.1.1.205]
inosine 5''''-monophosphate dehydrogenase n=2 Tax=Microbacterium RepID=UPI0003826572 rbh
SCNpilot_expt_1000_bf_scaffold_1253_8
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6957..7634)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E6EC32
Predicted integral membrane protein {ECO:0000313|EMBL:CDK00331.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
integral membrane protein
SCNpilot_expt_1000_bf_scaffold_1253_9
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7701..8540)
DNA (840bp) protein (280aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E4Q9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07848.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
superfamily I DNA and RNA helicase and helicase subunits
SCNpilot_expt_1000_bf_scaffold_1253_10
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8753..10255)
DNA (1503bp) protein (501aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
IMP dehydrogenase/GMP reductase; K00088 IMP dehydrogenase [EC:1.1.1.205]
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4R0_9MICO rbh
SCNpilot_expt_1000_bf_scaffold_1253_11
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10498..11850
DNA (1353bp) protein (451aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XQ37_9MICO
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:GAD35150.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
inner-membrane translocator
SCNpilot_expt_1000_bf_scaffold_1253_12
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11858..12838
DNA (981bp) protein (327aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YPR9_9MICO
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:GAD35149.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
SCNpilot_expt_1000_bf_scaffold_1253_13
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12828..13826
DNA (999bp) protein (333aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YX85_9MICO rbh
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAD35148.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
livG; branched-chain amino acid ABC transporter,ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_1253_14
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13823..14584
DNA (762bp) protein (254aa)
branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Microbacterium RepID=UPI00035EAA53
Amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EZP29079.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_1253_15
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14709..16070)
DNA (1362bp) protein (454aa)
Branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XQ29_9MICO rbh
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAD35145.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_1253_16
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16249..17181)
DNA (933bp) protein (311aa)
Protein RarD n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AHX4_9MICO
Protein rarD {ECO:0000313|EMBL:KIC59403.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
permease; K05786 chloramphenicol-sensitive protein RarD
SCNpilot_expt_1000_bf_scaffold_1253_17
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17312..17617)
DNA (306bp) protein (102aa)
10 kDa chaperonin n=2 Tax=Microbacterium RepID=H8E4R7_9MICO
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
groES; co-chaperonin GroES (HSP10); K04078 chaperonin GroES
SCNpilot_expt_1000_bf_scaffold_1253_18
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17735..18922
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AB94_9MICO
SAM-dependent methyltransferase {ECO:0000313|EMBL:KIC59401.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
SAM-dependent methyltransferase
SCNpilot_expt_1000_bf_scaffold_1253_19
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19037..19552)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BCM3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86394.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1253_20
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(19549..20631)
DNA (1083bp) protein (361aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1344956 species="Bacteria; Actinobacteria; Microco
metal-dependent protease with possible chaperone activity; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57]
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XQ24_9MICO rbh
SCNpilot_expt_1000_bf_scaffold_1253_21
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20726..21223)
DNA (498bp) protein (166aa)
acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128]
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ADJ4_9MICO
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EPD86396.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
SCNpilot_expt_1000_bf_scaffold_1253_22
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21220..21897)
DNA (678bp) protein (226aa)
Universal bacterial protein YeaZ n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AWF1_9MICO
Universal bacterial protein YeaZ {ECO:0000313|EMBL:EPD86397.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
inactive homolog of metal-dependent protease, molecular chaperone
SCNpilot_expt_1000_bf_scaffold_1253_23
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22044..22568)
DNA (525bp) protein (175aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E4S4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07863.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
alr; ATPase or kinase; K06925 UPF0079 ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_1253_24
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22737..23861)
DNA (1125bp) protein (375aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
alr; alanine racemase; K01775 alanine racemase [EC:5.1.1.1]
Alanine racemase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BCM6_9MICO
SCNpilot_expt_1000_bf_scaffold_1253_25
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23858..24268)
DNA (411bp) protein (137aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237180};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
phosphopantetheinyl transferase; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
Holo-[acyl-carrier-protein] synthase n=2 Tax=Microbacterium RepID=H8E4S6_9MICO
SCNpilot_expt_1000_bf_scaffold_1253_26
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24448..26307)
DNA (1860bp) protein (620aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_0016
glmS; glucosamine 6-phosphate synthetase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4S7_9MICO rbh
Displaying 26 items

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