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SCNpilot_expt_1000_bf_scaffold_3182

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3182_1
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3..209
DNA (207bp) protein (69aa)
30S ribosomal protein S3 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E518_9MICO
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
rpsC; ribosomal protein S3; K02982 small subunit ribosomal protein S3
SCNpilot_expt_1000_bf_scaffold_3182_2
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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209..628
DNA (420bp) protein (140aa)
50S ribosomal protein L16 n=1 Tax=Microbacterium RepID=UPI000306BDB4
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
rplP; ribosomal protein L16/L10E; K02878 large subunit ribosomal protein L16
SCNpilot_expt_1000_bf_scaffold_3182_3
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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628..792
DNA (165bp) protein (55aa)
50S ribosomal protein L29 n=1 Tax=Microbacterium RepID=UPI00036AA73A
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
rpmC; ribosomal protein L29; K02904 large subunit ribosomal protein L29
SCNpilot_expt_1000_bf_scaffold_3182_4
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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913..1239
DNA (327bp) protein (109aa)
30S ribosomal protein S17 n=1 Tax=Microbacterium sp. TS-1 RepID=U2XQ07_9MICO
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
rpsQ; ribosomal protein S17; K02961 small subunit ribosomal protein S17
SCNpilot_expt_1000_bf_scaffold_3182_5
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1236..1604
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=2 Tax=Microbacterium RepID=H8E514_9MICO
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
rplN; ribosomal protein L14; K02874 large subunit ribosomal protein L14
SCNpilot_expt_1000_bf_scaffold_3182_6
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


1609..1968
DNA (360bp) protein (120aa)
50S ribosomal protein L24 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E513_9MICO
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
rplX; ribosomal protein L24; K02895 large subunit ribosomal protein L24
SCNpilot_expt_1000_bf_scaffold_3182_7
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1968..2555
DNA (588bp) protein (196aa)
50S ribosomal protein L5 n=1 Tax=Microbacterium yannicii RepID=UPI00030A11C9 rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
rplE; ribosomal protein L5; K02931 large subunit ribosomal protein L5
SCNpilot_expt_1000_bf_scaffold_3182_8
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2638..3036
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Microbacterium sp. TS-1 RepID=U2XB71_9MICO
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
rpsH; ribosomal protein S8; K02994 small subunit ribosomal protein S8
SCNpilot_expt_1000_bf_scaffold_3182_9
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3043..3579
DNA (537bp) protein (179aa)
50S ribosomal protein L6 n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ADR5_9MICO rbh
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
rplF; ribosomal protein L6P/L9E; K02933 large subunit ribosomal protein L6
SCNpilot_expt_1000_bf_scaffold_3182_10
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3582..3941
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=1 Tax=Microbacterium sp. TS-1 RepID=U2YWM2_9MICO
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
rplR; ribosomal protein L18; K02881 large subunit ribosomal protein L18
SCNpilot_expt_1000_bf_scaffold_3182_11
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3938..4621
DNA (684bp) protein (228aa)
30S ribosomal protein S5 n=1 Tax=Microbacterium sp. TS-1 RepID=U2YP82_9MICO
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
rpsE; ribosomal protein S5; K02988 small subunit ribosomal protein S5
SCNpilot_expt_1000_bf_scaffold_3182_12
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4621..4806
DNA (186bp) protein (62aa)
50S ribosomal protein L30 n=2 Tax=Microbacterium RepID=H8E507_9MICO
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
rpmD; ribosomal protein L30/L7E; K02907 large subunit ribosomal protein L30
SCNpilot_expt_1000_bf_scaffold_3182_13
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4806..5375
DNA (570bp) protein (190aa)
50S ribosomal protein L15 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E506_9MICO rbh
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
rplO; ribosomal protein L15; K02876 large subunit ribosomal protein L15
SCNpilot_expt_1000_bf_scaffold_3182_14
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


5508..6836
DNA (1329bp) protein (443aa)
Protein translocase subunit SecY n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ADQ9_9MICO rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY
SCNpilot_expt_1000_bf_scaffold_3182_15
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6833..7426
DNA (594bp) protein (198aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbac
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3]
adenylate kinase n=1 Tax=Microbacterium sp. 11MF RepID=UPI00035C3E81 rbh
SCNpilot_expt_1000_bf_scaffold_3182_16
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7437..8279
DNA (843bp) protein (281aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
map; methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18]
Methionine aminopeptidase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E503_9MICO rbh
SCNpilot_expt_1000_bf_scaffold_3182_17
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8577..9098
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XB75_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAD34971.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
protein-disulfide isomerase
Displaying 17 items

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