name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_146_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..182)
|
Putative beta-oxoacyl-CoA thiolase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P604_AROAE
beta-oxoacyl-CoA thiolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
|
|
SCNpilot_expt_1000_bf_scaffold_146_2
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria
|
Not on your lists |
300..2321
|
Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CC46_DESTA
rbh
enoyl-CoA hydratase/carnithine racemase
rbh
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
|
|
SCNpilot_expt_1000_bf_scaffold_146_3
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2338..4113
|
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00035E9ADC
rbh
acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
|
|
SCNpilot_expt_1000_bf_scaffold_146_4
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4106..5653
|
long-chain-fatty-acid--CoA ligase 2 (EC:6.2.1.3)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00035F8661
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
|
|
SCNpilot_expt_1000_bf_scaffold_146_5
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5724..6740)
|
Ribose ABC transport system permease protein RbsC n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I929_GRIHO
putative ABC-type branched-chain amino acid transport system, permease component
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
|
|
SCNpilot_expt_1000_bf_scaffold_146_6
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6749..8302)
|
rbsA2; ribose import ATP-binding protein rbsA (EC:3.6.3.17); K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
Sugar ABC transporter ATP-binding protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YCJ7_9GAMM
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
|
|
SCNpilot_expt_1000_bf_scaffold_146_7
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8320..9384)
|
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GUQ2_9PROT
rbh
putative sugar ABC transporter; substrate-binding component; K11930 periplasmic protein TorT
rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
|
|
SCNpilot_expt_1000_bf_scaffold_146_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9427..10296)
|
Conserved hypothetical phenylacetyl-CoA:acceptor oxidoreductase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K6W0_AZOSB
padD; phenylacetyl-CoA:acceptor oxidoreductase; K07308 anaerobic dimethyl sulfoxide reductase subunit C (DMSO reductase anchor subunit)
Tax=RBG_16_Betaproteobacteria_64_18_curated
|
|
SCNpilot_expt_1000_bf_scaffold_146_9
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10293..10943)
|
phenylacetyl-CoA:acceptor oxidoreductase n=1 Tax=Azoarcus toluclasticus RepID=UPI00037959D3
rbh
padC; phenylacetyl-CoA:acceptor oxidoreductase
rbh
Conserved hypothetical phenylacetyl-CoA:acceptor oxidoreductase {ECO:0000313|EMBL:CAL94564.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
|
|
SCNpilot_expt_1000_bf_scaffold_146_10
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10940..13687)
|
Conserved hypothetical phenylacetyl-CoA:acceptor oxidoreductase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K6V8_AZOSB
rbh
Conserved hypothetical phenylacetyl-CoA:acceptor oxidoreductase {ECO:0000313|EMBL:CAL94563.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
padB; phenylacetyl-CoA:acceptor oxidoreductase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_146_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13825..14784)
|
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus B4 RepID=T1X9P3_VARPD
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGU49191.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_expt_1000_bf_scaffold_146_12
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14916..16499
|
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003669759
rbh
sulfatase
rbh
Tax=RBG_16_Betaproteobacteria_64_18_curated
|
|
SCNpilot_expt_1000_bf_scaffold_146_13
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16585..17607
|
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI000361BCBC
Outer membrane transporter protein TsaT; Flags: Precursor;; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
dctP; TRAP dicarboxylate transporter subunit DctP
|
|
SCNpilot_expt_1000_bf_scaffold_146_14
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17686..18111
|
TRAP-type C4-dicarboxylate transport system, small permease component n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNZ1_9BURK
TRAP-type C4-dicarboxylate transport system, small permease component {ECO:0000313|EMBL:EHR73199.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
putative TRAP-type C4-dicarboxylate transport system, small permease component
|
|
SCNpilot_expt_1000_bf_scaffold_146_15
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18128..19417
|
C4-dicarboxylate ABC transporter permease n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002F6A34C
TRAP dicarboxylate transporter subunit DctM
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
|
|
SCNpilot_expt_1000_bf_scaffold_146_16
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19611..20612
|
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000368AEBC
AraC family transcriptional regulator
rbh
Putative AraC-family transcriptional regulator {ECO:0000313|EMBL:CAL94562.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
|
|
SCNpilot_expt_1000_bf_scaffold_146_17
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20634..22211)
|
FAD dependent oxidoreductase n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WJA5_VEREI
rbh
FAD dependent oxidoreductase
rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABM57712.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
|
|
SCNpilot_expt_1000_bf_scaffold_146_18
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22229..23128)
|
Transcriptional regulator, AraC family n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WJA6_VEREI
rbh
helix-turn-helix domain-containing protein
rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABM57713.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
|
|
SCNpilot_expt_1000_bf_scaffold_146_19
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23379..24974
|
FAD dependent oxidoreductase n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WJA8_VEREI
rbh
FAD dependent oxidoreductase
rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABM57715.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
|
|
SCNpilot_expt_1000_bf_scaffold_146_20
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25002..25784
|
Cyclase family protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CLB2_VARPS
rbh
cyclase family protein
rbh
Cyclase family protein {ECO:0000313|EMBL:ACS17307.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_expt_1000_bf_scaffold_146_21
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25795..27939
|
Indolepyruvate ferredoxin oxidoreductase {ECO:0000313|EMBL:ABM57717.1}; EC=1.2.7.8 {ECO:0000313|EMBL:ABM57717.1};; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
indolepyruvate ferredoxin oxidoreductase (EC:1.2.7.8); K00179 indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
rbh
Indolepyruvate ferredoxin oxidoreductase n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WJB0_VEREI
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_146_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27936..29483
|
indolepyruvate oxidoreductase subunit B; K00180 indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
rbh
Putative indolepyruvate oxidoreductase subunit B n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CLB0_VARPS
rbh
Putative indolepyruvate oxidoreductase subunit B {ECO:0000313|EMBL:ACS17305.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_expt_1000_bf_scaffold_146_23
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29496..29912
|
Endoribonuclease L-PSP n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TMX8_MESCW
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ADV09283.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
|
|
SCNpilot_expt_1000_bf_scaffold_146_24
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30008..31561
|
Extracellular solute-binding protein, family 5 n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WJB3_VEREI
rbh
extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
rbh
Extracellular solute-binding protein, family 5 {ECO:0000313|EMBL:ABM57720.1}; Flags: Precursor;; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
|
|
SCNpilot_expt_1000_bf_scaffold_146_25
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31600..32604
|
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WJB4_VEREI
rbh
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein
rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABM57721.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
|
|
SCNpilot_expt_1000_bf_scaffold_146_26
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32601..33485
|
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WJB5_VEREI
rbh
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein
rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABM57722.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
|
|
SCNpilot_expt_1000_bf_scaffold_146_27
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33482..34378
|
ABC transporter related n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WJB6_VEREI
rbh
ABC transporter related {ECO:0000313|EMBL:ABM57723.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
|
|
SCNpilot_expt_1000_bf_scaffold_146_28
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34375..35193
|
ABC transporter related n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WJB7_VEREI
rbh
ABC transporter related {ECO:0000313|EMBL:ABM57724.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
|
|
SCNpilot_expt_1000_bf_scaffold_146_29
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(35195..35518)
|
4Fe-4S binding domain protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RU06_9BURK
fdxA; ferredoxin protein; K05524 ferredoxin
4Fe-4S binding domain protein {ECO:0000313|EMBL:EFV96242.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
|
|
SCNpilot_expt_1000_bf_scaffold_146_30
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(35590..36501)
|
LysR family transcriptional regulator n=1 Tax=Burkholderia sp. JPY347 RepID=UPI000373F4F7
rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EIJ48490.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW103.;"
LysR family transcriptional regulator; K03566 LysR family transcriptional regulator, glycine cleavage system transcriptional activator
rbh
|