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SCNpilot_expt_1000_bf_scaffold_257

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_257_1
unknown

Not on your lists

comp(2..79)
DNA (78bp) protein (26aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_257_2
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(543..2180)
DNA (1638bp) protein (546aa)
Conserved hypothetical phenylacetyl-CoA:acceptor oxidoreductase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K6V9_AZOSB
padC; phenylacetyl-CoA:acceptor oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
SCNpilot_expt_1000_bf_scaffold_257_3
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2177..5119)
DNA (2943bp) protein (981aa)
molybdopterin oxidoreductase id=14627367 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 rbh
molybdopterin oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
SCNpilot_expt_1000_bf_scaffold_257_4
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5353..6486
DNA (1134bp) protein (378aa)
hpd; 4-hydroxyphenylpyruvate dioxygenase; K00457 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] rbh
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:EAP74075.1}; EC=1.13.11.27 {ECO:0000313|EMBL:EAP74075.1};; TaxID=342110 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum UW551.;"
4-hydroxyphenylpyruvate dioxygenase protein n=4 Tax=Ralstonia solanacearum RepID=B5SK30_RALSL rbh
SCNpilot_expt_1000_bf_scaffold_257_5
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6483..7187
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037D88EA
Uncharacterized protein {ECO:0000313|EMBL:AJY45052.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_257_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7175..8674)
DNA (1500bp) protein (500aa)
Tricarballylate dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2K4Q1_9PROT rbh
tricarballylate dehydrogenase rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_expt_1000_bf_scaffold_257_7
unknown

Not on your lists

8804..9931
DNA (1128bp) protein (376aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_257_8
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9928..10455
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B3Q4_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ89339.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_expt_1000_bf_scaffold_257_9
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10455..10859
DNA (405bp) protein (135aa)
MaoC domain protein dehydratase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SP32_NOCSJ
dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:ABL83567.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
SCNpilot_expt_1000_bf_scaffold_257_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10939..12093)
DNA (1155bp) protein (385aa)
Thiolase, C-terminal domain-containing protein 10 n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GB72_ALIDK
thiolase, C-terminal domain-containing protein 10
Thiolase, C-terminal domain-containing protein 10 {ECO:0000313|EMBL:AEB83563.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_1000_bf_scaffold_257_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12090..12488)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U010_ALIDB
hypothetical protein; K07068
Uncharacterized protein {ECO:0000313|EMBL:ADV01009.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_1000_bf_scaffold_257_12
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12485..13180)
DNA (696bp) protein (232aa)
F0F1 ATP synthase subunit A {ECO:0000313|EMBL:EDP64325.1}; EC=3.6.3.14 {ECO:0000313|EMBL:EDP64325.1};; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
F0F1 ATP synthase subunit A n=1 Tax=alpha proteobacterium BAL199 RepID=A8TSS6_9PROT
GntR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_257_13
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

13473..14573
DNA (1101bp) protein (367aa)
Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YVH4_9MICO
NMT1/THI5 like domain-containing protein; K02051 NitT/TauT family transport system substrate-binding protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_257_14
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

14585..15691
DNA (1107bp) protein (369aa)
2-nitropropane dioxygenase NPD id=4840556 bin=GWC2_Methylomirabilis_70_16 species=Novosphingobium pentaromativorans genus=Novosphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
2-nitropropane dioxygenase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
SCNpilot_expt_1000_bf_scaffold_257_15
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15688..17832
DNA (2145bp) protein (715aa)
CoA-binding domain protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CI56_DESK7
Uncharacterized protein {ECO:0000313|EMBL:KEI45722.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
CoA-binding domain-containing protein
SCNpilot_expt_1000_bf_scaffold_257_16
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17859..18632
DNA (774bp) protein (258aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J2KT81_9BURK
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:EJL76228.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_257_17
Geobacillus sp. JF8, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18683..19450
DNA (768bp) protein (256aa)
ABC transporter permease n=1 Tax=Geobacillus sp. JF8 RepID=S6A2Q8_9BACI
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AGT32451.1}; TaxID=1345697 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. JF8.;"
SCNpilot_expt_1000_bf_scaffold_257_18
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

19477..20652
DNA (1176bp) protein (392aa)
bcd2; butyryl-CoA dehydrogenase (EC:1.3.99.2)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:ABB15094.1}; EC=1.3.8.1 {ECO:0000313|EMBL:ABB15094.1};; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 /; Z-2901).;"
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI0003765F6A
SCNpilot_expt_1000_bf_scaffold_257_19
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20692..21174
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TWZ1_9DELT
Aromatic compound degradation protein PaaI {ECO:0000313|EMBL:AKF86591.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
thioesterase superfamily protein
SCNpilot_expt_1000_bf_scaffold_257_20
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21176..22375
DNA (1200bp) protein (400aa)
namA; NADPH dehydrogenase NamA (EC:1.6.99.1)
L-fuculose-phosphate aldolase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HMT1_9BRAD
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
SCNpilot_expt_1000_bf_scaffold_257_21
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22419..23732)
DNA (1314bp) protein (438aa)
O-acetylhomoserine aminocarboxypropyltransferase (EC:2.5.1.49); K01740 O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
OAH/OAS sulfhydrylase n=1 Tax=Thauera sp. 27 RepID=N6XAF6_9RHOO
Tax=CG_Rhodocyc_01
SCNpilot_expt_1000_bf_scaffold_257_22
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23761..24231)
DNA (471bp) protein (157aa)
Putative CoA-binding protein id=1293867 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
putative CoA-binding protein; K06929
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
SCNpilot_expt_1000_bf_scaffold_257_23
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24293..25075
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00037A0267
Tfp pilus assembly protein FimV {ECO:0000313|EMBL:CDG85395.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_257_24
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25117..26325
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVS7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ12445.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_257_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26322..26843
DNA (522bp) protein (174aa)
nucleotidyltransferase n=1 Tax=Azoarcus toluclasticus RepID=UPI00035C151B
cytidylyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_expt_1000_bf_scaffold_257_26
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26872..27639)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G9B2_HERAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL63099.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
SCNpilot_expt_1000_bf_scaffold_257_27
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27648..28466)
DNA (819bp) protein (273aa)
bpl; biotin-protein ligase (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
Biotin-protein ligase {ECO:0000313|EMBL:AEK64027.1}; EC=6.3.4.15 {ECO:0000313|EMBL:AEK64027.1};; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
Biotin-protein ligase n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AE97_COLFT
SCNpilot_expt_1000_bf_scaffold_257_28
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28518..29654
DNA (1137bp) protein (379aa)
Putative integral membrane protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QH44_AZOSU
putative integral membrane protein
Putative integral membrane protein {ECO:0000313|EMBL:AEV25136.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_expt_1000_bf_scaffold_257_29
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29666..29977
DNA (312bp) protein (104aa)
ferredoxin n=1 Tax=Burkholderia ubonensis RepID=UPI00016A3AB0
ferredoxin-like protein
Ferredoxin-like protein {ECO:0000313|EMBL:ABI88501.1}; TaxID=339670 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia; cepacia (strain AMMD)).;"
SCNpilot_expt_1000_bf_scaffold_257_30
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29988..30674
DNA (687bp) protein (229aa)
Probable transmembrane protein n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q476M2_CUPPJ
transmembrane protein; K07018
Probable transmembrane protein {ECO:0000313|EMBL:AAZ59661.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
Displaying items 1-30 of 87 in total

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